RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 TBC1D13Q9NVG8 400 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 MARCH5Q9NX47 278 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 DNPEPQ9ULA0 475 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 STAP1Q9ULZ2 295 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
CDCA3-201ENST00000229265 TECTAO75443 2155 aa11.09□□□□□ -0.63
CDCA3-201ENST00000229265 ANK1P16157 1881 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 BCLAF3A2AJT9 711 aaKnown RBP11.08□□□□□ -0.64
CDCA3-201ENST00000229265 HACD1B0YJ81 288 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 TP73O15350 636 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 EFEMP2O95967 443 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 RB1P06400 928 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 FAM200BP0CF97 657 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ODC1P11926 461 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 KRT10P13645 584 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ITGA8P53708 1063 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 BCAR1P56945 870 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ZP2Q05996 745 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 NR1H3Q13133 447 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 GLRA4Q5JXX5 417 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 PDZD4Q76G19 769 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-201ENST00000229265 TAOK1Q7L7X3 1001 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 PPIL6Q8IXY8 311 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 FUKQ8N0W3 1084 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 C12orf76Q8N812 135 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-201ENST00000229265 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ARL8AQ96BM9 186 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 TLCD1Q96CP7 247 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 B3GALT6Q96L58 329 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ZFP42Q96MM3 310 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 CFAP57Q96MR6 1250 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 GAD1Q99259 594 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 SEMA4AQ9H3S1 761 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 POPDC2Q9HBU9 364 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 LRRC4Q9HBW1 653 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 DDX43Q9NXZ2 648 aaKnown RBP11.08□□□□□ -0.64
CDCA3-201ENST00000229265 CWC15Q9P013 229 aaKnown RBP11.08□□□□□ -0.64
CDCA3-201ENST00000229265 INPP5FQ9Y2H2 1132 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 R3HDM2Q9Y2K5 976 aaKnown RBP11.08□□□□□ -0.64
CDCA3-201ENST00000229265 ACTL7BQ9Y614 415 aa11.08□□□□□ -0.64
CDCA3-201ENST00000229265 DENND4AQ7Z401 1863 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 E7EVH7 732 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 PI4K2BG5E9Z4 385 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 MCF2LO15068 1137 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 GJB6O95452 261 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 NR1D1P20393 614 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 IL4RP24394 825 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 HTR7P34969 479 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 IRAK1P51617 712 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 CDH6P55285 790 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 DPYSL3Q14195 570 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 NOMO1Q15155 1222 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 DUSP6Q16828 381 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 TTMPQ5BVD1 217 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 ANKRD20A8PQ5CZ79 823 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
CDCA3-201ENST00000229265 ACBD5Q5T8D3 534 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-201ENST00000229265 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 KAZNQ674X7 775 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 PM20D1Q6GTS8 502 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 CENPUQ71F23 418 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 ZNF771Q7L3S4 317 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-201ENST00000229265 PIGZQ86VD9 579 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 SPATS2Q86XZ4 545 aaKnown RBP11.07□□□□□ -0.64
CDCA3-201ENST00000229265 TDRPQ86YL5 185 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 RFX6Q8HWS3 928 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 EMC1Q8N766 993 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 ACTL9Q8TC94 416 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-201ENST00000229265 FAM172AQ8WUF8 416 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 RIN2Q8WYP3 895 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-201ENST00000229265 NTAN1Q96AB6 310 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 SUSD3Q96L08 255 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 SLC2A13Q96QE2 648 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 NPY6RQ99463 290 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 HERPUD2Q9BSE4 406 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 ADAM7Q9H2U9 754 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 PAK5Q9P286 719 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 TJP2Q9UDY2 1190 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 NME7Q9Y5B8 376 aa11.07□□□□□ -0.64
CDCA3-201ENST00000229265 SF3B1O75533 1304 aaKnown RBP eCLIP11.07□□□□□ -0.649e-6■■■■■ 68.9
CDCA3-201ENST00000229265 CARNS1A5YM72 827 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 SGK1O00141 431 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 APOL1O14791 398 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 RASGRF2O14827 1237 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 NCAM2O15394 837 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 DAB1O75553 588 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 SPAG6O75602 509 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 GABBR2O75899 941 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 POMCP01189 267 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms