RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TAF5Q15542 800 aa25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 SLC10A6Q3KNW5 377 aa25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 TAF1BQ53T94 588 aaPredicted RBP25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 CMPK2Q5EBM0 449 aa25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 RAB3IL1Q8TBN0 382 aa25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 ZNF333Q96JL9 665 aa25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 PRDM16Q9HAZ2 1276 aa25.8■■□□□ 1.72
RUNDC3A-201ENST00000225441 CCDC22O60826 627 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 SNRPAP09012 282 aaKnown RBP25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 YWHAGP61981 247 aaKnown RBP eCLIP25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 PRKD1Q15139 912 aaPredicted RBP25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 KBTBD12Q3ZCT8 623 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 FAM183BPQ6ZVS7 135 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 LONP2Q86WA8 852 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 CDKL3Q8IVW4 592 aaPredicted RBP25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 EIF2AQ9BY44 585 aaKnown RBP25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 CNTN3Q9P232 1028 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 A8MUI8 341 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 SCNN1AP37088 669 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 NDST1P52848 882 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 CLNS1AP54105 237 aaKnown RBP25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 BCAR1P56945 870 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 CTC1Q2NKJ3 1217 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 FAM26DQ5JW98 314 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 LRRC6Q86X45 466 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 IGDCC3Q8IVU1 814 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 SLC4A5Q9BY07 1137 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 DPP3Q9NY33 737 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 SLC17A7Q9P2U7 560 aa25.79■■□□□ 1.72
RUNDC3A-201ENST00000225441 HSPA1AP0DMV8 641 aaKnown RBP25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 HSPA1BP0DMV9 641 aaKnown RBP25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 CDK7P50613 346 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 ARFIP2P53365 341 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 FAAP100Q0VG06 881 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 MMRN1Q13201 1228 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 DBN1Q16643 649 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 CYS1Q717R9 158 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 ARCQ7LC44 396 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 FAM13CQ8NE31 585 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 ARMC5Q96C12 935 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 ACAP3Q96P50 834 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 CRISPLD2Q9H0B8 497 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 RAB6BQ9NRW1 208 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 TSPAN16Q9UKR8 245 aa25.78■■□□□ 1.72
RUNDC3A-201ENST00000225441 LIN7AO14910 233 aaPredicted RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 KIF1CO43896 1103 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 LUC7L3O95232 432 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 ZBED1O96006 694 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 CCNFP41002 786 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 NR2C2P49116 596 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 YWHAZP63104 245 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 CDK16Q00536 496 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 CCDC14Q49A88 953 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 TMEM110Q86TL2 294 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 MTDHQ86UE4 582 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 ZC3H18Q86VM9 953 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 UBA3Q8TBC4 463 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 THOC1Q96FV9 657 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 PLEKHA5Q9HAU0 1116 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 PCDH18Q9HCL0 1135 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 TTLL3Q9Y4R7 772 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 E5RJQ4 531 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 DIAPH2O60879 1101 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 HAUS5O94927 633 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 C1QAP02745 245 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 TPSB2P20231 275 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 IL4RP24394 825 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 SDC4P31431 198 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 SLC6A3Q01959 620 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 TPSAB1Q15661 275 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 PKDCCQ504Y2 493 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 UBXN11Q5T124 520 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 NPNTQ6UXI9 565 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 NSL1Q96IY1 281 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 SERAC1Q96JX3 654 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 TRIM6Q9C030 488 aaPredicted RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 IQCGQ9H095 443 aaKnown RBP25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 KANSL3Q9P2N6 904 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 ST3GAL5Q9UNP4 418 aa25.77■■□□□ 1.72
RUNDC3A-201ENST00000225441 COPEO14579 308 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 HGSO14964 777 aaPredicted RBP25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 KCNN4O15554 427 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 PFKMP08237 780 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 GNAZP19086 355 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 SERPINB4P48594 390 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 SERPINB9P50453 376 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 PLEKHG4Q58EX7 1191 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 FBXO47Q5MNV8 452 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 ZNF618Q5T7W0 954 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 TRNP1Q6NT89 227 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 OLFML1Q6UWY5 402 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 PQLC3Q8N755 202 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 MMADHCQ9H3L0 296 aaPredicted RBP25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 POPDC2Q9HBU9 364 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 ETNK2Q9NVF9 386 aa25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 ZC3H7BQ9UGR2 993 aaKnown RBP25.76■■□□□ 1.71
RUNDC3A-201ENST00000225441 PEX11AO75192 247 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 GCATO75600 419 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 KRT38O76015 456 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 PTPN9P43378 593 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms