RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 RASGRF2O14827 1237 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 MGEA5O60502 916 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 ANP32DO95626 131 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 RPLP2P05387 115 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 VIMP08670 466 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 TKTP29401 623 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 PCK1P35558 622 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 HTRA3P83110 453 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 CAV1Q03135 178 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 C6orf118Q5T5N4 469 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 EGFLAMQ63HQ2 1017 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 FAM131BQ86XD5 332 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 ANKRD13BQ86YJ7 626 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 FAM71DQ8N9W8 422 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 HHIPL1Q96JK4 782 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 PEBP4Q96S96 227 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 RBM15Q96T37 977 aaKnown RBP eCLIP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 ELAC2Q9BQ52 826 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 VPS37BQ9H9H4 285 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 NOP53Q9NZM5 478 aaKnown RBP9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 SLC12A4Q9UP95 1085 aa9.23□□□□□ -0.93
MTHFD1-201ENST00000216605 INHAP05111 366 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 NUDT17P0C025 328 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 NPR3P17342 541 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 MMP13P45452 471 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 LHX1P48742 406 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 NDUFV1P49821 464 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 TKTL1P51854 596 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 NSUN2Q08J23 767 aaKnown RBP eCLIP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 LPIN1Q14693 890 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 EFHC1Q5JVL4 640 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 TRNP1Q6NT89 227 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ZDHHC17Q8IUH5 632 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 DEFB106AQ8N104 65 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 LRRN4Q8WUT4 740 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 RNF34Q969K3 372 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 CCDC77Q9BR77 488 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 SNRNP25Q9BV90 132 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 TBK1Q9UHD2 729 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 NEU2Q9Y3R4 380 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ZNF236Q9UL36 1845 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 MYBPHLA2RUH7 354 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 EIF3FO00303 357 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 APOL1O14791 398 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 RIPK2O43353 540 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 CABYRO75952 493 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ODC1P11926 461 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ZFXP17010 805 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 TFE3P19532 575 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 WARSP23381 471 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 PCSK1P29120 753 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 LRPAP1P30533 357 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 HOXC8P31273 242 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ROR1Q01973 937 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 PTK7Q13308 1070 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 GLB1LQ6UWU2 654 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 BBS12Q6ZW61 710 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ABI1Q8IZP0 508 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 EPS8L3Q8TE67 593 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 DUSP16Q9BY84 665 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 C15orf41Q9Y2V0 281 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 PRG3Q9Y2Y8 225 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 KBTBD13C9JR72 458 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 M0QYT0 321 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 LIN7AO14910 233 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 BEST1O76090 585 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 AGTP01019 485 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ARL4AP40617 200 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 OR1G1P47890 313 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ARHGEF6Q15052 776 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ACCSLQ4AC99 568 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 CCDC38Q502W7 563 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 TIGD5Q53EQ6 642 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 FAM133BQ5BKY9 247 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 XKR4Q5GH76 650 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 LRRC34Q8IZ02 419 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ALLCQ8N6M5 410 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 ADAM32Q8TC27 787 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 SLCO2A1Q92959 643 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 STAMBPL1Q96FJ0 436 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 HSFY1Q96LI6 401 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 KCNK16Q96T55 309 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 PAIP2BQ9ULR5 123 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 CEP350Q5VT06 3117 aa9.22□□□□□ -0.93
MTHFD1-201ENST00000216605 XPO1O14980 1071 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 ZBED1O96006 694 aa9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 CTCFP49711 727 aaPredicted RBP9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 HDAC4P56524 1084 aa9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 YWHAZP63104 245 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 UBAP2Q5T6F2 1119 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 TRMT10CQ7L0Y3 403 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 TAOK1Q7L7X3 1001 aa9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 THEM5Q8N1Q8 247 aa9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 C3orf58Q8NDZ4 430 aa9.21□□□□□ -0.93
MTHFD1-201ENST00000216605 GSTCDQ8NEC7 633 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms