RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 POU1F1P28069 291 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 NUP62P37198 522 aaPredicted RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 SULT1E1P49888 294 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 HK2P52789 917 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 RRP1BQ14684 758 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 TMEM132DQ14C87 1099 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 PRMT9Q6P2P2 845 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ABRAXAS1Q6UWZ7 409 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ERO1BQ86YB8 467 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 RAET1EQ8TD07 263 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 FAM151AQ8WW52 585 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 HTRA1Q92743 480 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 RNF145Q96MT1 663 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CNPY3Q9BT09 278 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SIK2Q9H0K1 926 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SLC38A7Q9NVC3 462 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 GPRC5DQ9NZD1 345 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CCDC59Q9P031 241 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 GPC6Q9Y625 555 aaPredicted RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 PTPRUQ92729 1446 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 A0A0G2JLW4 131 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 CCDC189A1A4V9 331 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 CSF1RP07333 972 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 LCP1P13796 627 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 CARTPTQ16568 116 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 WDR72Q3MJ13 1102 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 SGO1Q5FBB7 561 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ATAD3BQ5T9A4 648 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 TMEM26Q6ZUK4 368 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 C8orf59Q8N0T1 100 aaPredicted RBP10.71□□□□□ -0.69
VCL-201ENST00000211998 SETD9Q8NE22 299 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 RNFT2Q96EX2 444 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 SPEF1Q9Y4P9 236 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 RPS6KL1Q9Y6S9 549 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 LOC100506127A0A0U1RQW1 187 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 EIF3DO15371 548 aaKnown RBP eCLIP10.71□□□□□ -0.69
VCL-201ENST00000211998 KCNQ2O43526 872 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ARIH2O95376 493 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ZNF682O95780 498 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 TCF3P15923 654 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 GSSP48637 474 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 C1DQ13901 141 aaKnown RBP10.71□□□□□ -0.69
VCL-201ENST00000211998 SNRNP35Q16560 246 aaKnown RBP10.71□□□□□ -0.69
VCL-201ENST00000211998 ZFP69Q49AA0 526 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 C6orf183Q5T699 404 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 IER5Q5VY09 327 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 PRR5LQ6MZQ0 368 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 YAF2Q8IY57 180 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 MAGEE2Q8TD90 523 aaPredicted RBP10.71□□□□□ -0.69
VCL-201ENST00000211998 APBB2Q92870 758 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 SLC5A5Q92911 643 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 NSMCE2Q96MF7 247 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 OSBPL7Q9BZF2 842 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ZNF221Q9UK13 617 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 AGAP1Q9UPQ3 857 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ZNF263O14978 683 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 IL6P05231 212 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 SPDYE7PQ495Y7 208 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ATP6AP1LQ52LC2 224 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 GLRA4Q5JXX5 417 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 NEK5Q6P3R8 708 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 SH3KBP1Q96B97 665 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ERLEC1Q96DZ1 483 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 RIT2Q99578 217 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ZNF70Q9UC06 446 aaPredicted RBP10.71□□□□□ -0.69
VCL-201ENST00000211998 ATP6V1HQ9UI12 483 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 PACSIN3Q9UKS6 424 aa10.71□□□□□ -0.69
VCL-201ENST00000211998 ADSSP30520 456 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 LRPAP1P30533 357 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 SSTR1P30872 391 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 GRIK1P39086 918 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 CCNFP41002 786 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 MMP14P50281 582 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 RTP1P59025 263 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 DLG4P78352 724 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 LGALS3BPQ08380 585 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 BAATQ14032 418 aaPredicted RBP10.71□□□□□ -0.7
VCL-201ENST00000211998 AKIRIN2Q53H80 203 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 CCNJLQ8IV13 435 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 TBC1D19Q8N5T2 526 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 ZNF398Q8TD17 642 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 DCLK3Q9C098 648 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 EPB41L1Q9H4G0 881 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 CYP4F12Q9HCS2 524 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 FBXO28Q9NVF7 368 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 KBTBD13C9JR72 458 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 STK25O00506 426 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 MRASO14807 208 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 NR3C2P08235 984 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 TGM2P21980 687 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 PTGER2P43116 358 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 BNC1Q01954 994 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 EMC2Q15006 297 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 TAF1CQ15572 869 aaPredicted RBP10.71□□□□□ -0.7
VCL-201ENST00000211998 GALNTL6Q49A17 601 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 MZT2BQ6NZ67 158 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 ZNF677Q86XU0 584 aa10.71□□□□□ -0.7
VCL-201ENST00000211998 EID3Q8N140 333 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms