RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 PzpQ61838 1495 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Surf2P09926 257 aaKnown RBP18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 PfklP12382 780 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rbp1Q00915 135 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 ChfrQ810L3 664 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Sult3a2G5E904 293 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ccdc177Q3UHB8 706 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Btbd7Q8CFE5 1130 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Coq9Q8K1Z0 313 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 BroxQ8K2Q7 411 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Atp13a1Q9EPE9 1200 aaKnown RBP18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rhox13F6YCR7 232 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dnajc11Q5U458 559 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dnajc1Q61712 552 aaKnown RBP18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nup54Q8BTS4 510 aaKnown RBP18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 BsndQ8VIM4 307 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Xpr1Q9Z0U0 695 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mkl2P59759 1080 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 P3h1Q3V1T4 739 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Lcp1Q61233 627 aaKnown RBP18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mcfd2Q8K5B2 145 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Snx7Q9CY18 387 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 KhnynQ80U38 671 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ube3cQ80U95 1083 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Timmdc1Q8BUY5 285 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm13088A2AGW6 460 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cdc25aP48964 514 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Scrn3Q3TMH2 418 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tmc3Q7TQ69 1130 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Fancd2Q80V62 1450 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Sbno2Q7TNB8 1349 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Lbhd1A0A087WPA0 259 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm7168A0AUV4 508 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Fbrsl1E9Q9T0 1031 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Phb2O35129 299 aaKnown RBP18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rpl36P47964 105 aaKnown RBP18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Arf3P61205 181 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Arf1P84078 181 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Trim69Q80X56 500 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 NapepldQ8BH82 396 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Zhx2Q8C0C0 836 aaKnown RBP18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 E2f4Q8R0K9 410 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 IscuQ9D7P6 168 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ifi207E9Q3L4 978 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Psd3Q2PFD7 1037 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Orm1Q60590 207 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm28168A0A087WNP1 180 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Eif4a1P60843 406 aaKnown RBP18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mis18bp1Q80WQ8 998 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 2610042L04RikQ9D073 150 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Chaf1bQ9D0N7 572 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Extl3Q9WVL6 918 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ugt1a5B2RT14 529 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Odc1P00860 461 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Flt3Q00342 1000 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tatdn3Q3U1C6 294 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 IqchQ9D2K4 1071 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nphs1Q9QZS7 1256 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mrc2Q64449 1479 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ccna1Q61456 421 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tlr11Q6R5P0 926 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Scfd2Q8BTY8 684 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 4931406P16RikQ8C5X1 1059 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Use1Q9CQ56 270 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cab39lQ9DB16 337 aa18.82■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cdh4P39038 913 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Mgat1P27808 447 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cd300lgQ1ERP8 331 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tdpoz4Q6YCH2 370 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tas2r104Q7M723 302 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Klhl35Q9CZ49 574 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Pnp2Q9D8C9 305 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 C87977A2A958 498 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 AfpP02772 605 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 DctP29812 517 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Chl1P70232 1209 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Larp7Q05CL8 570 aaKnown RBP18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Pgrmc2Q80UU9 217 aaKnown RBP18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 9230104L09RikQ9D264 133 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Kiaa1107Q80TK0 1369 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Klhl3E0CZ16 587 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Aqp1Q02013 269 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dok7Q18PE0 504 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 BlmhQ8R016 455 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rcan1Q9JHG6 198 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 S100a2J3QMC7 104 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 PolP11369 1281 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gria1P23818 907 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 H2afxP27661 143 aaKnown RBP18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 ItgaeQ60677 1167 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Slitrk6Q8C110 840 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Acat1Q8QZT1 424 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Defb15Q8R2I5 79 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Cst11Q9D269 139 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Gm16486A0A1D5RMD1 1434 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dsg1bQ7TSF1 1060 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Tmem179Q8BHH9 233 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Rfwd3Q8CIK8 774 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nxnl1Q8VC33 217 aa18.81■□□□□ 0.6
Trim71-201ENSMUST00000111816 Dpy30Q99LT0 99 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms