RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 PkdccQ5RJI4 492 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Shroom1Q5SX79 823 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 FntaQ61239 377 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Mef2dQ63943 514 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Klra3Q64329 266 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Pwwp2aQ69Z61 730 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 AmphQ7TQF7 686 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Best2Q8BGM5 508 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Arl14epQ8BIX3 276 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Smoc1Q8BLY1 463 aaKnown RBP12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ppm1kQ8BXN7 372 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Trub1Q8C0D0 338 aaKnown RBP12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Smtnl2Q8CI12 456 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Stau2Q8CJ67 570 aaKnown RBP12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Traf3ip2Q8N7N6 555 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gle1Q8R322 699 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Nle1Q8VEJ4 485 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ccdc65Q8VHI7 493 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Wrnip1Q91XU0 660 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Mdm1Q9D067 708 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Chordc1Q9D1P4 331 aaKnown RBP12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Fam3aQ9D8T0 230 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Lman2Q9DBH5 358 aaKnown RBP12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 NckipsdQ9ESJ4 714 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Il17rbQ9JIP3 499 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Sept5Q9Z2Q6 369 aa12.88□□□□□ -0.35
Trim50-202ENSMUST00000111180 Igkv5-45A0A0B4J1J1 115 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Igkv5-43A0A0B4J1J2 115 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Cyp4a12bA2A974 508 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 IqccA2ADZ8 418 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Arhgap42B2RQE8 841 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ccdc144bE9PVZ3 520 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Mdh1P14152 334 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 YwhagP61982 247 aaKnown RBP12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 SbdsP70122 250 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Cdh9P70407 786 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Runx2Q08775 607 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Pgap2Q3TQR0 254 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Hdhd2Q3UGR5 259 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 CttnQ60598 546 aaKnown RBP12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Sema3cQ62181 751 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Syn2Q64332 586 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Retreg2Q6NS82 541 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ttyh3Q6P5F7 524 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gpatch2lQ6PE65 482 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Rasa4Q6PFQ7 802 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Atp1a2Q6PIE5 1020 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Arhgap26Q6ZQ82 814 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Clec2eQ80XD9 204 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gm5622Q810Q0 167 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ublcp1Q8BGR9 318 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Fbxo38Q8BMI0 1194 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 BoraQ8BS90 525 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Klhl7Q8BUL5 586 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Robo4Q8C310 1012 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Pdcd2lQ8C5N5 364 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Cfap36Q8C6E0 343 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Leng8Q8CBY3 785 aaKnown RBP12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Fbxl13Q8CDU4 790 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 CtbsQ8R242 366 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Vmn1r218Q8R261 298 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gys2Q8VCB3 704 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Cyp4a12aQ91WL5 508 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Unc45aQ99KD5 944 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gemin2Q9CQQ4 269 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Atad1Q9D5T0 361 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Syap1Q9D5V6 365 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Pebp4Q9D9G2 242 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Abcg8Q9DBM0 673 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Cog8Q9JJA2 640 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ascl3Q9JJR7 174 aa12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Top3bQ9Z321 862 aaKnown RBP12.87□□□□□ -0.35
Trim50-202ENSMUST00000111180 Vps13aQ5H8C4 3166 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Osbpl9A2A8Z1 736 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ssxb9A2BI93 185 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gm5483B2RV77 97 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Zfp174B9EJW5 407 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Vmn2r72D3Z4N8 856 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gm8113E0CXS8 587 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Rasal2E9PW37 1286 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gm5926E9PWJ8 236 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Dcpp2E9PYC2 171 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Dcpp1L7N1X9 171 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 KlO35082 1014 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Pdia4P08003 638 aaKnown RBP12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Zfy2P20662 777 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ighmbp2P40694 993 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Akr1b8P45377 316 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ccndbp1Q3TVC7 356 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Fbxw11Q5SRY7 542 aaKnown RBP12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Anks6Q6GQX6 883 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Jade3Q6IE82 823 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ccdc117Q6PB51 277 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 PdgfrlQ6PE55 375 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gpr142Q7TQN9 365 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gpr62Q80UC6 358 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Gpt2Q8BGT5 522 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ctxn3Q8BXZ0 80 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Actl9Q8CG27 415 aa12.86□□□□□ -0.35
Trim50-202ENSMUST00000111180 Mill1Q8HWE7 395 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms