RNA–Protein interactions for RNA: ENSMUST00000097734.10

Sdf4-202, Transcript of 45 kDa calcium-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Sdf4, Length 973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-202ENSMUST00000097734 Hmbox1Q8BJA3 419 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Srek1Q8BZX4 494 aaKnown RBP13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Stk38Q91VJ4 465 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Pcdhgb5Q91XX5 926 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Edem1Q925U4 652 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Rilpl2Q99LE1 197 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Pard3bQ9CSB4 1203 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Raver1Q9CW46 748 aaKnown RBP13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Mfsd10Q9D2V8 456 aaKnown RBP13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Rnf14Q9JI90 485 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Vnn3Q9QZ25 500 aa13.54□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Olfr634-ps1A0A1B0GRN7 318 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Lcn6A2AJB9 181 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Zbtb34A2ATY4 518 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Herc3A6H6S0 1050 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Usp2O88623 613 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Mup5P11591 180 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 H2-Q8P14430 326 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 GhrhrP32082 423 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Foxn3Q499D0 457 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Gcnt3Q5JCT0 437 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Rap1gap2Q5SVL6 712 aaKnown RBP13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Nfe2l2Q60795 597 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Utf1Q6J1H4 339 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Adck2Q6NSR3 617 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Trpm4Q7TN37 1213 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 WtipQ7TQJ8 398 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Adipor2Q8BQS5 386 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Syt15Q8C6N3 418 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Mtrf1Q8K126 446 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Olfr356Q8VFP5 315 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Olfr342Q8VGK7 312 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Setd7Q8VHL1 366 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Hps3Q91VB4 1002 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Laptm4bQ91XQ6 227 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Wdr6Q99ME2 1125 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Yeats4Q9CR11 227 aaKnown RBP13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Alg14Q9D081 217 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Arl13aQ9D416 372 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Polr2dQ9D7M8 142 aaKnown RBP13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Tmem225Q9D9S2 230 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 PyglQ9ET01 850 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Stx6Q9JKK1 255 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 CalcrlQ9R1W5 463 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Eif2s3yQ9Z0N2 472 aa13.53□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Celsr3Q91ZI0 3301 aa13.52□□□□□ -0.24
Sdf4-202ENSMUST00000097734 Igkv5-39A0A0G2JDV4 115 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Adam34A2RSG8 714 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 5830411N06RikB3F5L4 1112 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Trim30cD3YVI9 513 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Gm9920D3YVZ2 140 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Nfxl1E9Q8I7 918 aaKnown RBP13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Tekt5G5E8A8 557 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Gm8298J3QPI0 401 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Tpd52l1O54818 204 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Grk6O70293 576 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Ncam1P13595 1115 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Bmp6P20722 510 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 HdcP23738 662 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Rps14P62264 151 aaKnown RBP13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 RalaP63321 206 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Bpifa1P97361 278 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Cpa2Q504N0 417 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Rnf215Q5SPX3 379 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Zfp251Q6PCX8 632 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Zfp397Q7TNK4 527 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Znf12Q7TSI0 686 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Elp6Q8BK75 266 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Pum3Q8BKS9 647 aaKnown RBP13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 R3hcc1Q8BSI6 488 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Elmo3Q8BYZ7 720 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Q8BZJ8 459 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Apol9bQ8C7I4 310 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Brd3Q8K2F0 726 aaKnown RBP13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Vmn1r89Q8R256 316 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 CoasyQ9DBL7 563 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Thap11Q9JJD0 305 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Ubr5Q80TP3 2792 aa13.52□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Ranbp2Q9ERU9 3053 aaKnown RBP13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Mllt3A2AM29 569 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Gm7275E9Q1B3 247 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Ebf2O08792 575 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Rabep1O35551 862 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Dnase1l3O55070 310 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Kcnk4O88454 398 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Slc7a2P18581 657 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 RdxP26043 583 aaKnown RBP13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 TktP40142 623 aaKnown RBP13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Id4P41139 161 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Cdx2P43241 311 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Ppp3caP63328 521 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 NptnP97300 397 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Upf3bQ3ULL6 472 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Stard3Q61542 446 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Rrp12Q6P5B0 1295 aaKnown RBP13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Olfr1198Q7TR12 308 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Ap4e1Q80V94 1122 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Fbxw21Q8BI38 468 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Slc7a14Q8BXR1 771 aa13.51□□□□□ -0.25
Sdf4-202ENSMUST00000097734 Gnl3Q8CI11 538 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms