RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Pard3bQ9CSB4 1203 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Vmn2r17E9PYF5 849 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Bmpr2O35607 1038 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Vmn2r1O70410 912 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PtprcP06800 1291 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Neurog2P70447 263 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gspt2Q149F3 632 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gpd1lQ3ULJ0 351 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ppp1r13lQ5I1X5 824 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Eif2dQ61211 570 aaKnown RBP13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gdpd5Q640M6 607 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gja6Q6S5G4 283 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Armc12Q80X86 340 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ccdc28bQ8CEG5 200 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Smg8Q8VE18 991 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Pofut2Q8VHI3 429 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 QpctQ9CYK2 362 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Dtwd1Q9D8U7 304 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Fbxo16Q9QZM9 334 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Aldh18a1Q9Z110 795 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Top3bQ9Z321 862 aaKnown RBP13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mzf1S4R1L6 814 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Vmn2r25W4VSP2 855 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 C7D3YXF5 845 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Vmn1r39G3UWE6 305 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 ShdO88834 343 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 UmpsP13439 481 aaKnown RBP13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Sparcl1P70663 650 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Pecam1Q08481 727 aaKnown RBP13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Col24a1Q30D77 1733 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Q32P12 615 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gcnt3Q5JCT0 437 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mief2Q5NCS9 454 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Capn3Q64691 821 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr1057Q7TR75 315 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Baiap2l2Q80Y61 522 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rps6kc1Q8BLK9 1056 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Tmem82Q8R115 356 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Angel1Q8VCU0 667 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr356Q8VFP5 315 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 NonoQ99K48 473 aaKnown RBP13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 AadacQ99PG0 398 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Polr3hQ9D2C6 204 aaKnown RBP13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PllpQ9DCU2 182 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Map3k14Q9WUL6 942 aa13.12□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Sf3b1Q99NB9 1304 aaKnown RBP13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr1354E9Q5G9 310 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 OgdhlE9Q7L0 1029 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr611K7N609 323 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr612L7N462 323 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Asgr1P34927 284 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Klf1P46099 358 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ranbp9P69566 653 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ubxn2bQ0KL01 331 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Prmt9Q3U3W5 846 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ccdc154Q6RUT8 657 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Q8CCC3 530 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Arfip2Q8K221 341 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 MrgpreQ91ZB7 310 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Arl8bQ9CQW2 186 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Micu3Q9CTY5 523 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PmpcbQ9CXT8 489 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mxra7Q9CZH7 178 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 LactbQ9EP89 551 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PodxlQ9R0M4 503 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 GghQ9Z0L8 317 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mapk13Q9Z1B7 366 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ptchd4B9EKX1 904 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ces1bD3Z5G7 567 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Pdzd7E9Q9W7 1021 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Vmn2r100E9QAZ9 850 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Klhl33G3UW92 533 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 TnfP06804 235 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PrkcdP28867 674 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Irs1P35569 1233 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Psma2P49722 234 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 MipP51180 263 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Lag3Q61790 521 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 CochQ62507 552 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Tmcc1Q69ZZ6 649 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PoliQ6R3M4 717 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr533Q7TRT7 320 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Nacc1Q7TSZ8 514 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rassf6Q80UQ2 353 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Fam160b1Q8CDM8 764 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Pcdha1Q91Y21 948 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Arl2Q9D0J4 184 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Acox2Q9QXD1 681 aa13.11□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Itga9B8JK39 1036 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 StrnO55106 780 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Slc10a3P21129 473 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 SiaeP70665 541 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Adamts1P97857 968 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Togaram2Q3TYG6 1002 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Arhgap20Q6IFT4 1182 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Acap2Q6ZQK5 770 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Fnip2Q80TD3 1108 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Fzd10Q8BKG4 582 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Lrif1Q8CDD9 755 aa13.1□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Adgrg3Q8R0T6 542 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 116.5 ms