RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	JAKMIP3	Q5VZ66	844 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	FAM160B1	Q5W0V3	765 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	PDXDC1	Q6P996	788 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	CPLX2	Q6PUV4	134 aa	Known RBP	6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	PLPPR4	Q7Z2D5	763 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	RAB11FIP4	Q86YS3	637 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MYOCD	Q8IZQ8	938 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	PRR18	Q8N4B5	295 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	USP38	Q8NB14	1042 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	DBF4B	Q8NFT6	615 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MVB12A	Q96EY5	273 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	JAKMIP1	Q96N16	626 aa	Known RBP	6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ASB2	Q96Q27	587 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	TMEM209	Q96SK2	561 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	GORASP1	Q9BQQ3	440 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	IFIH1	Q9BYX4	1025 aa	Known RBP	6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	C22orf23	Q9BZE7	217 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MAN1C1	Q9NR34	630 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	SETD4	Q9NVD3	440 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.91	□□□□□ -1.3	2e-7	■■□□□ 12.7
CASC19-238	ENST00000641523	SIRT5	Q9NXA8	310 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	DMTF1	Q9Y222	760 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	DGKB	Q9Y6T7	804 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MYH7B	A7E2Y1	1941 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MUC3A	Q02505	3323 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	SCN5A	Q14524	2016 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	SCO2	A0A1W2PP80	73 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	hCG_1642624	A0A1W2PR95	340 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MBLAC1	A4D2B0	266 aa	Predicted RBP	6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ATP9A	O75110	1047 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	AGR2	O95994	175 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	TNFAIP3	P21580	790 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	CDR1	P51861	262 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ITGA1	P56199	1179 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ADAM17	P78536	824 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	DEFB103A	P81534	67 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ADAM9	Q13443	819 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	GPNMB	Q14956	572 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	RTP5	Q14D33	572 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	LLGL1	Q15334	1064 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ADCK5	Q3MIX3	580 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523		Q6ZUG5	572 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	OR5AN1	Q8NGI8	311 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	HIST1H2AH	Q96KK5	128 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	TCEANC2	Q96MN5	208 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	YME1L1	Q96TA2	773 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	HIST1H2AJ	Q99878	128 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	FTHL17	Q9BXU8	183 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	RNF26	Q9BY78	433 aa	Predicted RBP	6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	ZMYND12	Q9H0C1	365 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	TBC1D22B	Q9NU19	505 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	PCDHGB3	Q9Y5G1	929 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	MTCH2	Q9Y6C9	303 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	SQOR	Q9Y6N5	450 aa		6.91	□□□□□ -1.3
CASC19-238	ENST00000641523	KAT6A	Q92794	2004 aa		6.9	□□□□□ -1.3
CASC19-238	ENST00000641523	SPTBN5	Q9NRC6	3674 aa	Known RBP	6.9	□□□□□ -1.3
CASC19-238	ENST00000641523		A0A0A6YYK5	440 aa	Predicted RBP	6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	MYOCOS	A0A1B0GUC4	107 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	GSTTP1	A0A1W2PQM5	241 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	ZNF503-AS2	A6NEH8	195 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	CYP3A4	P08684	503 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	XPA	P23025	273 aa	Predicted RBP	6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	RPS6KB1	P23443	525 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	ADCY8	P40145	1251 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	GPR15	P49685	360 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	STAT5B	P51692	787 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	ACTR2	P61160	394 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	HTRA4	P83105	476 aa	Predicted RBP	6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	KRT72	Q14CN4	511 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	TARBP2	Q15633	366 aa	Known RBP	6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	C3orf36	Q3SXR2	165 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	PPP4R3A	Q6IN85	833 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	MIS18BP1	Q6P0N0	1132 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	MPZL3	Q6UWV2	235 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	OVCH2	Q7RTZ1	564 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	MAATS1	Q7Z4T9	603 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	B3GNT8	Q7Z7M8	397 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	CAMKK1	Q8N5S9	505 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	SNRNP27	Q8WVK2	155 aa	Known RBP	6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	SECISBP2L	Q93073	1101 aa	Known RBP	6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	NOX5	Q96PH1	765 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	DIRC2	Q96SL1	478 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	SOX7	Q9BT81	388 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	AGXT2	Q9BYV1	514 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	NLRC4	Q9NPP4	1024 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	SH3GLB2	Q9NR46	395 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	KLHL11	Q9NVR0	708 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	CROT	Q9UKG9	612 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	PCDHA5	Q9Y5H7	936 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	SNX14	Q9Y5W7	946 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	CYP46A1	Q9Y6A2	500 aa		6.9	□□□□□ -1.31
CASC19-238	ENST00000641523	PIEZO1	Q92508	2521 aa		6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	COL1A2	P08123	1366 aa		6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	COL4A6	Q14031	1691 aa		6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	LINC01553	A4QN01	128 aa		6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	IPO5	O00410	1097 aa	Known RBP	6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	BIN1	O00499	593 aa		6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	CPLX1	O14810	134 aa		6.89	□□□□□ -1.31
CASC19-238	ENST00000641523	HBP1	O60381	514 aa		6.89	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms