RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CSPG4P5Q96PW8 444 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 PIGVQ9NUD9 493 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 GOLGA6AQ9NYA3 693 aa17.07■□□□□ 0.32
PHGDH-216ENST00000641375 COL4A4P53420 1690 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-216ENST00000641375 SYNJ2BP-COX16A0A087WUM0 186 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 CFAP69A5D8W1 941 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 OR4Q2P0C623 313 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ZSCAN5DPP0CG00 497 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ETS1P14921 441 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 FGFR3P22607 806 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 SLC11A1P49279 550 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 CTXN3Q4LDR2 81 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 BSPRYQ5W0U4 402 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 NPNTQ6UXI9 565 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 PRUNE1Q86TP1 453 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ANKLE1Q8NAG6 615 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 SEMA4AQ9H3S1 761 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 MARCH5Q9NX47 278 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ABI2Q9NYB9 513 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 CWC15Q9P013 229 aaKnown RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 COX16Q9P0S2 106 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 HEY1Q9Y5J3 304 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 H7C0C1 242 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 TRIM66O15016 1216 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 RFC2P35250 354 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ATP5OP48047 213 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 SLC5A3P53794 718 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 GDF10P55107 478 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 SCAPQ12770 1279 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 CNKSR3Q6P9H4 555 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ZC3H18Q86VM9 953 aaKnown RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ZCCHC9Q8N567 271 aaKnown RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 OXCT2Q9BYC2 517 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-216ENST00000641375 GPR62Q9BZJ7 368 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 EPB41L4BQ9H329 900 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 FAM204AQ9H8W3 233 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ADAM21Q9UKJ8 722 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 SHOC2Q9UQ13 582 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 ATP11BQ9Y2G3 1177 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 PCDHB5Q9Y5E4 795 aa17.06■□□□□ 0.32
PHGDH-216ENST00000641375 H3BRJ5 948 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 SMAPO00193 183 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 TNFRSF10BO14763 440 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 RIPK2O43353 540 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 GALTP07902 379 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 ACTN2P35609 894 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 XRCC4Q13426 336 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 BZW1Q7L1Q6 419 aaKnown RBP17.05■□□□□ 0.32
PHGDH-216ENST00000641375 CROCCP2Q86T23 111 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 RELL1Q8IUW5 271 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 UNC45BQ8IWX7 931 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 FAM71DQ8N9W8 422 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 WDR6Q9NNW5 1121 aaKnown RBP17.05■□□□□ 0.32
PHGDH-216ENST00000641375 ABCC13Q9NSE7 274 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 DDIT4Q9NX09 232 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.05■□□□□ 0.32
PHGDH-216ENST00000641375 GOT1P17174 413 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 ADRA1BP35368 520 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 CHKAP35790 457 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 MAGEA11P43364 429 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 SLC29A2Q14542 456 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 RNASEH2BQ5TBB1 312 aaKnown RBP17.05■□□□□ 0.32
PHGDH-216ENST00000641375 OR2W6PQ8NHA6 318 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 SCAMP5Q8TAC9 235 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 EDEM1Q92611 657 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 C8orf48Q96LL4 319 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 TMBIM4Q9HC24 238 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 RSPH14Q9UHP6 348 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
PHGDH-216ENST00000641375 BCLAF3A2AJT9 711 aaKnown RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 HMGB1P1B2RPK0 211 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 H7C4K7 107 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 CLTBP09497 229 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 GJA8P48165 433 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 TTMPQ5BVD1 217 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 HOOK3Q86VS8 718 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 SCN4BQ8IWT1 228 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 PYROXD2Q8N2H3 581 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 FAM76AQ8TAV0 307 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 DIS3LQ8TF46 1054 aaKnown RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 RNF139Q8WU17 664 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 CDC42EP4Q9H3Q1 356 aaKnown RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 MYO16Q9Y6X6 1858 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 RPL22P35268 128 aaKnown RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 ALDH7A1P49419 539 aaKnown RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 CTCFP49711 727 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 ZNF135P52742 658 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms