RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 AP4E1Q9UPM8 1137 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 KLHL20Q9Y2M5 609 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 VPS4BO75351 444 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 PNMA6AP0CW24 399 aaPredicted RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 NUDT2P50583 147 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 UBXN2BQ14CS0 331 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 EDRF1Q3B7T1 1238 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 RAET1GQ6H3X3 334 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 TXNRD3Q86VQ6 643 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 KLHL23Q8NBE8 558 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 TRPC4APQ8TEL6 797 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 PLA2G12BQ9BX93 195 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 ANKRD65E5RJM6 399 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 TPST1O60507 370 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 MARC1Q5VT66 337 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 TMEM176AQ96HP8 235 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 TBCDQ9BTW9 1192 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 CTNNAL1Q9UBT7 734 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 SGPL1O95470 568 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 NUP62P37198 522 aaPredicted RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 NPTX2P47972 431 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 CLK3P49761 638 aaKnown RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 CSTF3Q12996 717 aaKnown RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 NOGQ13253 232 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 TCEAL5Q5H9L2 206 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 SCARA3Q6AZY7 606 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 RGMBQ6NW40 437 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 ZNF677Q86XU0 584 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 UXS1Q8NBZ7 420 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 MRPL48Q96GC5 212 aaKnown RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 STOML1Q9UBI4 398 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 DNAJC16Q9Y2G8 782 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 GNRH1P01148 92 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 CHGBP05060 677 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 TYMPP19971 482 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 KCNJ1P48048 391 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 PEX5P50542 639 aa16.53■□□□□ 0.24
CLN5-208ENST00000636183 BST2Q10589 180 aaKnown RBP16.53■□□□□ 0.24
CLN5-208ENST00000636183 KLK7P49862 253 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TTC23Q5W5X9 447 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 AP1ARQ63HQ0 302 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 OTOP2Q7RTS6 562 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 SMARCD1Q96GM5 515 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 ELL3Q9HB65 397 aaPredicted RBP16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3DA0A087WVF3 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3IA0A087WXS9 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3EA0A087X179 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3KA0A087X1G2 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3FA6NER0 549 aaPredicted RBP16.52■□□□□ 0.24
CLN5-208ENST00000636183 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3LB9A6J9 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 SLC9A3R1O14745 358 aaPredicted RBP16.52■□□□□ 0.24
CLN5-208ENST00000636183 OR10H2O60403 315 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3HP0C7X1 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 WASP42768 502 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 RAD23BP54727 409 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3GQ6DHY5 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3CQ6IPX1 549 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TBC1D3Q8IZP1 549 aaPredicted RBP16.52■□□□□ 0.24
CLN5-208ENST00000636183 hCG_2014768A0A024R1R8 64 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 LINC00854A0A1B0GVQ3 168 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 TRIM66O15016 1216 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 SLC2A4P14672 509 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 ITIH2P19823 946 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 ITGA8P53708 1063 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 MYL6P60660 151 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 PPIL6Q8IXY8 311 aa16.52■□□□□ 0.24
CLN5-208ENST00000636183 ANO9A1A5B4 782 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 TRDMT1O14717 391 aaKnown RBP16.52■□□□□ 0.23
CLN5-208ENST00000636183 MAGEA4P43358 317 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 SLC26A2P50443 739 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 IL2P60568 153 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 CSHL1Q14406 222 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 ACAD10Q6JQN1 1059 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 ADAM21Q9UKJ8 722 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 VGLL3A8MV65 326 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 NCAM2O15394 837 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 POU6F1Q14863 301 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 SLC18A3Q16572 532 aa16.52■□□□□ 0.23
CLN5-208ENST00000636183 AGO4Q9HCK5 861 aaKnown RBP16.52■□□□□ 0.23
CLN5-208ENST00000636183 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.52■□□□□ 0.23
CLN5-208ENST00000636183 RASGRP1O95267 797 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 A0A088AWK7 358 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
CLN5-208ENST00000636183 SLC37A4O43826 429 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 ANXA5P08758 320 aa16.51■□□□□ 0.23
CLN5-208ENST00000636183 ZNF10P21506 573 aaPredicted RBP16.51■□□□□ 0.23
CLN5-208ENST00000636183 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
CLN5-208ENST00000636183 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms