RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CTXN1P60606 82 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 MXRA7P84157 204 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 TNFAIP2Q03169 654 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 SP140Q13342 867 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 DAG1Q14118 895 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 GEN1Q17RS7 908 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 FLYWCH1Q4VC44 716 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 AMOTQ4VCS5 1084 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 FAM209BQ5JX69 171 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 DACT2Q5SW24 774 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF66Q6ZN08 573 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 SESTD1Q86VW0 696 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 SMAP1Q8IYB5 467 aaPredicted RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 TRMT2AQ8IZ69 625 aaKnown RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 NKAPQ8N5F7 415 aaKnown RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 RNF152Q8N8N0 203 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 FBXO18Q8NFZ0 1043 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 BRIX1Q8TDN6 353 aaKnown RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 PNISRQ8TF01 805 aaKnown RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 KBTBD7Q8WVZ9 684 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 RAB24Q969Q5 203 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 CRB3Q9BUF7 120 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 SENP6Q9GZR1 1112 aaPredicted RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 SPRTNQ9H040 489 aaPredicted RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 MRPL46Q9H2W6 279 aaKnown RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 CERS4Q9HA82 394 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 PNPLA8Q9NP80 782 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 CNNM1Q9NRU3 951 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 MOCS1Q9NZB8 636 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 LUZP4Q9P127 313 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 SRP68Q9UHB9 627 aaKnown RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 AJAP1Q9UKB5 411 aaPredicted RBP2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 CORO2BQ9UQ03 480 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 ATRNL1Q5VV63 1379 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 VCANP13611 3396 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 PRUNE2Q8WUY3 3088 aa2.94□□□□□ -1.94
SMARCB1-208ENST00000634926 PASKQ96RG2 1323 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 TRPM7Q96QT4 1865 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 COL4A1P02462 1669 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 POM121BA6NF01 834 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 F2RL2O00254 374 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 NCK2O43639 380 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 HSP90AB1P08238 724 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 KRT10P13645 584 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 BRAFP15056 766 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ABCB4P21439 1286 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 SFPQP23246 707 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PCSK1P29120 753 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CHRNA5P30532 468 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 FOLR3P41439 243 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ARFIP2P53365 341 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 EIF5P55010 431 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 SUMO3P55854 103 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CLRN1P58418 232 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 LINC00205P59089 165 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 TUBA4AP68366 448 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 POU5F1BQ06416 359 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 SF3B3Q15393 1217 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PDCD2Q16342 344 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ATP2B3Q16720 1220 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 TMEM119Q4V9L6 283 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 KHDC1LQ5JSQ8 128 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 HIBCHQ6NVY1 386 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF530Q6P9A1 599 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PDZD4Q76G19 769 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF572Q7Z3I7 529 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PPP1R3BQ86XI6 285 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CPXCR1Q8N123 301 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 IL17RDQ8NFM7 739 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 TFAP2BQ92481 460 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 KIAA1191Q96A73 305 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 NMD3Q96D46 503 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 HEPHQ9BQS7 1158 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 QTRT1Q9BXR0 403 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 TRIM54Q9BYV2 358 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 DPH1Q9BZG8 443 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 MAF1Q9H063 256 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 LDAHQ9H6V9 325 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 GNL3LQ9NVN8 582 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 HSFX1Q9UBD0 423 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CPNE7Q9UBL6 633 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 AFF4Q9UHB7 1163 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 NARFQ9UHQ1 456 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CPA4Q9UI42 421 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ZDHHC8Q9ULC8 765 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PCDHA6Q9UN73 950 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 ZBTB1Q9Y2K1 713 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 MED16Q9Y2X0 877 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PCDHA1Q9Y5I3 950 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 MORC2Q9Y6X9 1032 aaPredicted RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 PSME4Q14997 1843 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 DDX60Q8IY21 1712 aaKnown RBP2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 KIF7Q2M1P5 1343 aa2.93□□□□□ -1.94
SMARCB1-208ENST00000634926 CNTNAP1P78357 1384 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 IBTKQ9P2D0 1353 aaPredicted RBP2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 HEG1Q9ULI3 1381 aa2.92□□□□□ -1.94
SMARCB1-208ENST00000634926 A0A087WV62 115 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms