RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 EPHB3P54753 998 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 SREBF2Q12772 1141 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 PLD1Q13393 1074 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 TOP3AQ13472 1001 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-216ENST00000628124 CHST13Q8NET6 341 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 AHCYL2Q96HN2 611 aaKnown RBP9.17□□□□□ -0.94
GABRB3-216ENST00000628124 TRIM9Q9C026 710 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 GPAMQ9HCL2 828 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 VPS28Q9UK41 221 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 GTF3C4Q9UKN8 822 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 PSME2Q9UL46 239 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 TEX33O43247 280 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 PBLDP30039 288 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-216ENST00000628124 SPIRE1Q08AE8 756 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 CYP2A13Q16696 494 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 INTS11Q5TA45 600 aaKnown RBP9.17□□□□□ -0.94
GABRB3-216ENST00000628124 FBXW10Q5XX13 1052 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 IFNLR1Q8IU57 520 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-216ENST00000628124 OR52L1Q8NGH7 329 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 RIT2Q99578 217 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 PRKD2Q9BZL6 878 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 RIBC2Q9H4K1 309 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 LRRC4BQ9NT99 713 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 NCKAP1Q9Y2A7 1128 aa9.17□□□□□ -0.94
GABRB3-216ENST00000628124 E2F8A0AVK6 867 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 TNFRSF21O75509 655 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 GRAP2O75791 330 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ALOX12P18054 663 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 GTF2H1P32780 548 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 AVPR1AP37288 418 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CBX5P45973 191 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 HMGCS2P54868 508 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SUSD4Q5VX71 490 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ZFP1Q6P2D0 407 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 LY9Q9HBG7 655 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ZNF232Q9UNY5 417 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 KPNA6O60684 536 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SLC2A4P14672 509 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 TTKP33981 857 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 LPIN1Q14693 890 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 INO80DQ53TQ3 878 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SH2D3CQ8N5H7 860 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 POP5Q969H6 163 aaKnown RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 TRIM10Q9UDY6 481 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NEDD4P46934 1319 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 PALLDQ8WX93 1383 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 KDM6AO15550 1401 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NCF1BA6NI72 391 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NCF1CA8MVU1 366 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 AP3D1O14617 1153 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CDC40O60508 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SNX4O95219 450 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NCF1P14598 390 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ARID5BQ14865 1188 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 R3HDM1Q15032 1099 aaKnown RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 PTGISQ16647 500 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 PAGE2BQ5JRK9 111 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 FGD3Q5JSP0 725 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 RASGRP2Q7LDG7 609 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CARNMT1Q8N4J0 409 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 USP38Q8NB14 1042 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 MYLPFQ96A32 169 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 C9orf16Q9BUW7 83 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ZNF518BQ9C0D4 1074 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NARFQ9UHQ1 456 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ALG6Q9Y672 507 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 H7C1W4 665 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 KRT33AO76009 404 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 HLA-DQA2P01906 255 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 MYBL2P10244 700 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NQO1P15559 274 aaKnown RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ZNF7P17097 686 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CASP1P29466 404 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NTSP30990 170 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 TLX1P31314 330 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 STARP49675 285 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 XRCC4Q13426 336 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 FAM117BQ6P1L5 589 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 TBC1D10CQ8IV04 446 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CCDC33Q8N5R6 958 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 KYQ8NBH2 561 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SERAC1Q96JX3 654 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 TRAPPC9Q96Q05 1148 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 PANX3Q96QZ0 392 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 MLPHQ9BV36 600 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 SPATA5L1Q9BVQ7 753 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CAB39LQ9H9S4 337 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 CCDC177Q9NQR7 707 aaPredicted RBP9.16□□□□□ -0.94
GABRB3-216ENST00000628124 ENTPD7Q9NQZ7 604 aa9.16□□□□□ -0.94
GABRB3-216ENST00000628124 NDOR1Q9UHB4 597 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms