RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZNF578Q96N58 590 aaPredicted RBP14.71□□□□□ -0.05
SNX1-214ENST00000625244 ELF4Q99607 663 aaPredicted RBP14.71□□□□□ -0.05
SNX1-214ENST00000625244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNX1-214ENST00000625244 ODF2LQ9ULJ1 636 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 NME7Q9Y5B8 376 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 PCDHB1Q9Y5F3 818 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 HEMK1Q9Y5R4 338 aaPredicted RBP14.71□□□□□ -0.05
SNX1-214ENST00000625244 PTPRJQ12913 1337 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 ABCB4P21439 1286 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 PRKCHP24723 683 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 PGFP49763 221 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 ZNF131P52739 623 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 RBP5P82980 135 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 ILKQ13418 452 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 GEN1Q17RS7 908 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 KDM7AQ6ZMT4 941 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 HS2ST1Q7LGA3 356 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 NUP93Q8N1F7 819 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 PDZD8Q8NEN9 1154 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 SCAMP5Q8TAC9 235 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 KCNE4Q8WWG9 221 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 OVCA2Q8WZ82 227 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 FAM213AQ9BRX8 229 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 FAM117AQ9C073 453 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 ZNF518BQ9C0D4 1074 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 FOXP1Q9H334 677 aaPredicted RBP14.7□□□□□ -0.06
SNX1-214ENST00000625244 PARVGQ9HBI0 331 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 FBXO10Q9UK96 956 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 ITGA11Q9UKX5 1188 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 CREBBPQ92793 2442 aa14.7□□□□□ -0.06
SNX1-214ENST00000625244 NPC1O15118 1278 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 VILLO15195 856 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 FAM13AO94988 1023 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 SEMA4FO95754 770 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 MPOP05164 745 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 WARSP23381 471 aaKnown RBP14.69□□□□□ -0.06
SNX1-214ENST00000625244 TRAPPC10P48553 1259 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 TUBP50607 506 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 TOB1P50616 345 aaPredicted RBP14.69□□□□□ -0.06
SNX1-214ENST00000625244 CDH8P55286 799 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 C21orf59P57076 290 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 ZNF234Q14588 700 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 DPH6Q7L8W6 267 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 KRI1Q8N9T8 703 aaKnown RBP14.69□□□□□ -0.06
SNX1-214ENST00000625244 CACTINQ8WUQ7 758 aaKnown RBP14.69□□□□□ -0.06
SNX1-214ENST00000625244 POMGNT1Q8WZA1 660 aa14.69□□□□□ -0.06
SNX1-214ENST00000625244 ACE2Q9BYF1 805 aaPredicted RBP14.69□□□□□ -0.06
SNX1-214ENST00000625244 ARID1BQ8NFD5 2236 aaPredicted RBP14.69□□□□□ -0.06
SNX1-214ENST00000625244 CLDN5O00501 218 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 EPB41L2O43491 1005 aaKnown RBP14.68□□□□□ -0.06
SNX1-214ENST00000625244 TBX18O95935 607 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 ZDHHC11BP0C7U3 371 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 MFAP3P55082 362 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 NFKB2Q00653 900 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 C6orf132Q5T0Z8 1188 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 DTHD1Q6ZMT9 781 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 ZNF574Q6ZN55 896 aaPredicted RBP14.68□□□□□ -0.06
SNX1-214ENST00000625244 BRSK2Q8IWQ3 736 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 EXD3Q8N9H8 876 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 SORCS1Q8WY21 1168 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 SLC6A18Q96N87 628 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 KCNK16Q96T55 309 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 KLF16Q9BXK1 252 aaPredicted RBP14.68□□□□□ -0.06
SNX1-214ENST00000625244 MTMR12Q9C0I1 747 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 NACA2Q9H009 215 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 LHX5Q9H2C1 402 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 SLC27A6Q9Y2P4 619 aa14.68□□□□□ -0.06
SNX1-214ENST00000625244 CKAP5Q14008 2032 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 RTN3O95197 1032 aaPredicted RBP14.67□□□□□ -0.06
SNX1-214ENST00000625244 MT-CO3P00414 261 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 WNT1P04628 370 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 IGHV4-34P06331 123 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 EPHX1P07099 455 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 GP1BBP13224 206 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 CKMT2P17540 419 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 BCAT1P54687 386 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 RACK1P63244 317 aaKnown RBP14.67□□□□□ -0.06
SNX1-214ENST00000625244 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 GPBP1Q86WP2 473 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 OR2T3Q8NH03 318 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 SAAL1Q96ER3 474 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 HPDLQ96IR7 371 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 MRPL45Q9BRJ2 306 aaKnown RBP14.67□□□□□ -0.06
SNX1-214ENST00000625244 DPH1Q9BZG8 443 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 ELOVL4Q9GZR5 314 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 BTBD1Q9H0C5 482 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 DPEP3Q9H4B8 488 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 ZHX3Q9H4I2 956 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNX1-214ENST00000625244 ADAMTS1Q9UHI8 967 aa14.67□□□□□ -0.06
SNX1-214ENST00000625244 NOL7Q9UMY1 257 aaKnown RBP14.67□□□□□ -0.06
SNX1-214ENST00000625244 K7ENP7 123 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 TLR5O60602 858 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 PTPN1P18031 435 aaKnown RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 EPHA8P29322 1005 aaPredicted RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 GNL1P36915 607 aaPredicted RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 GABREP78334 506 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 ST3GAL1Q11201 340 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms