RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 AGBL3Q8NEM8 1001 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 TARS2Q9BW92 718 aaKnown RBP13.49□□□□□ -0.25
CHD1L-210ENST00000622533 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
CHD1L-210ENST00000622533 CISHQ9NSE2 258 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 SH3GLB1Q9Y371 365 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 TMEM221A6NGB7 291 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 COPEO14579 308 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 RAD17O75943 681 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 APOC2P02655 101 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 PROCP04070 461 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 KRT3P12035 628 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 FDFT1P37268 417 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 CBLBQ13191 982 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 SLC44A1Q8WWI5 657 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 ZBTB45Q96K62 511 aaPredicted RBP13.49□□□□□ -0.25
CHD1L-210ENST00000622533 PRPF18Q99633 342 aaKnown RBP13.49□□□□□ -0.25
CHD1L-210ENST00000622533 MRPL1Q9BYD6 325 aaKnown RBP13.49□□□□□ -0.25
CHD1L-210ENST00000622533 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
CHD1L-210ENST00000622533 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
CHD1L-210ENST00000622533 CHRNA5P30532 468 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 SERPINB8P50452 374 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 IRX4P78413 519 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 RTKN2Q8IZC4 609 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 E2F7Q96AV8 911 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 MMP19Q99542 508 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
CHD1L-210ENST00000622533 DTNAQ9Y4J8 743 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 A0A1B0GTW7 788 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 SPATA31C2B4DYI2 1134 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 ZMPSTE24O75844 475 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 WEE2P0C1S8 567 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 CDK18Q07002 472 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 PPIDQ08752 370 aaKnown RBP13.48□□□□□ -0.25
CHD1L-210ENST00000622533 TRPC3Q13507 836 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 SLC44A4Q53GD3 710 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 LGSNQ5TDP6 509 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 DIS3LQ8TF46 1054 aaKnown RBP13.48□□□□□ -0.25
CHD1L-210ENST00000622533 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 APOL6Q9BWW8 343 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 ZNF302Q9NR11 478 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 INIPQ9NRY2 104 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 TELO2Q9Y4R8 837 aa13.48□□□□□ -0.25
CHD1L-210ENST00000622533 LRCH4O75427 683 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 TRPA1O75762 1119 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 TMEM63AO94886 807 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 EIF3EP60228 445 aaKnown RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 DPYSL3Q14195 570 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 DUOXA2Q1HG44 320 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 PNPLA8Q9NP80 782 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 PAIP2BQ9ULR5 123 aaKnown RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 MAFBQ9Y5Q3 323 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 LOC100653049A0A140TA62 436 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 TRIM49D1C9J1S8 452 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 DNAJA2O60884 412 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 KRT34O76011 436 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 EFNA5P52803 228 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 BASP1P80723 227 aaKnown RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 ZBTB41Q5SVQ8 909 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 TTC39BQ5VTQ0 682 aaPredicted RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 ATG16L1Q676U5 607 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 RFX6Q8HWS3 928 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 KCTD6Q8NC69 237 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 DCUN1D1Q96GG9 259 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 NIFKQ9BYG3 293 aaKnown RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 TUBGCP4Q9UGJ1 667 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
CHD1L-210ENST00000622533 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
CHD1L-210ENST00000622533 H3BNX3 289 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 AP1G1O43747 822 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 STRNO43815 780 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
CHD1L-210ENST00000622533 RGS20O76081 388 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 TOP3BO95985 862 aaKnown RBP13.46□□□□□ -0.25
CHD1L-210ENST00000622533 ELK3P41970 407 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 YWHAGP61981 247 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHD1L-210ENST00000622533 MYBPC1Q00872 1141 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 SP4Q02446 784 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 TBCCQ15814 346 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 CRLF3Q8IUI8 442 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 NUDCD3Q8IVD9 361 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 CTAGE3PQ8IX95 158 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 WDTC1Q8N5D0 677 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
CHD1L-210ENST00000622533 VPS33BQ9H267 617 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
CHD1L-210ENST00000622533 DMTF1Q9Y222 760 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 POMPQ9Y244 141 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 BTBD19C9JJ37 291 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 CHADO15335 359 aa13.46□□□□□ -0.25
CHD1L-210ENST00000622533 ADCY3O60266 1144 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms