RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 TMPRSS6Q8IU80 811 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 PABPC5Q96DU9 382 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ACTL7BQ9Y614 415 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 MTSS1O43312 755 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CSDE1O75534 798 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ABHD2P08910 425 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CYP2C9P11712 490 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ATP6V1B1P15313 513 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 MIPP30301 263 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 MFSD4BQ5TF39 518 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 LRRC74BQ6ZQY2 392 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF572Q7Z3I7 529 aaPredicted RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 FAM83AQ86UY5 434 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 DCP1BQ8IZD4 617 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 HS6ST3Q8IZP7 471 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 DNERQ8NFT8 737 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CALML6Q8TD86 181 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 SHC3Q92529 594 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 PPP1R2P1Q96PQ5 205 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 LRRC40Q9H9A6 602 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 PIH1D1Q9NWS0 290 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 TMEM161AQ9NX61 479 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 PKD2L2Q9NZM6 624 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ITGA11Q9UKX5 1188 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 FSCN2O14926 492 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 UNC5CO95185 931 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CETPP11597 493 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CPA3P15088 417 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 HSPA13P48723 471 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 HARS2P49590 506 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CACNA2D1P54289 1103 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 TAS2R40P59535 323 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 TGFB2P61812 414 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 LRRC74AQ0VAA2 488 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 NFIL3Q16649 462 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 DENND1BQ6P3S1 775 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 BNC2Q6ZN30 1099 aaPredicted RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 PCYOX1LQ8NBM8 494 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CEP41Q9BYV8 373 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ADNPQ9H2P0 1102 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 WDCPQ9H6R7 721 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 A0A087WZ62 844 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 FKBP6O75344 327 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 EIF4BP23588 611 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 BCAT1P54687 386 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 TBL3Q12788 808 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 LAMB3Q13751 1172 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 SNX30Q5VWJ9 437 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 FAM131BQ86XD5 332 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 IL31RAQ8NI17 732 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 BTN2A2Q8WVV5 523 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 FDXACB1Q9BRP7 624 aaPredicted RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 APOL5Q9BWW9 433 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 BARX2Q9UMQ3 279 aaPredicted RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 C5P01031 1676 aa8.59□□□□□ -1.04
ALMS1-208ENST00000620466 CCL15-CCL14A0A0B4J2E2 113 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ABCE1P61221 599 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 NCALDP61601 193 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 CCL15Q16663 113 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 TRMT5Q32P41 509 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ZRANB3Q5FWF4 1079 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ZCCHC23Q6ZST2 131 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 CCDC60Q8IWA6 550 aaPredicted RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 TRIM48Q8IWZ4 208 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 WNK4Q96J92 1243 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 CINPQ9BW66 212 aaPredicted RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 LACTBL1A8MY62 500 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 GRIN3BO60391 1043 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 CAPZA2P47755 286 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 CLK2P49760 499 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 TWF1Q12792 350 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 C10orf120Q5SQS8 335 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 METTL7BQ6UX53 244 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 C11orf74Q86VG3 221 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ADGRF2Q8IZF7 708 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 DRG1Q9Y295 367 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ZMYM2Q9UBW7 1377 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 BAZ2BQ9UIF8 2168 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ZNF142P52746 1687 aaPredicted RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 APOC4-APOC2K7ER74 178 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 ARHGEF9O43307 516 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 TIMM44O43615 452 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 APOC2P02655 101 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 PGAM1P18669 254 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 MGAT1P26572 445 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 BST2Q10589 180 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 SEL1L3Q68CR1 1132 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 NAIF1Q69YI7 327 aaPredicted RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 PTRHD1Q6GMV3 140 aaKnown RBP8.58□□□□□ -1.04
ALMS1-208ENST00000620466 PTF1AQ7RTS3 328 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 DEFB107AQ8IZN7 70 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 GPRC5AQ8NFJ5 357 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 SEMA4DQ92854 862 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 DDIT4Q9NX09 232 aa8.58□□□□□ -1.04
ALMS1-208ENST00000620466 SLC25A13Q9UJS0 675 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms