RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 DNPH1O43598 174 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 EXOC3O60645 756 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 TAF5LO75529 589 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 TMIGD3P0DMS9 266 aaPredicted RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 KLRK1P26718 216 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 CLK3P49761 638 aaKnown RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 HOXA4Q00056 320 aaPredicted RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 SEMA3BQ13214 749 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 DHX8Q14562 1220 aaKnown RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 GRM4Q14833 912 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 STRIP1Q5VSL9 837 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 CCDC144NLQ6NUI1 221 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 RINT1Q6NUQ1 792 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 MSANTD2Q6P1R3 559 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 KLHL17Q6TDP4 642 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 KRT27Q7Z3Y8 459 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 ARHGEF25Q86VW2 580 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 NKAPQ8N5F7 415 aaKnown RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 LINC01465Q8N7H1 131 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 ANKRD42Q8N9B4 389 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 SPATA5Q8NB90 893 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 MACROD1Q9BQ69 325 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 RTKNQ9BST9 563 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 TMEM120AQ9BXJ8 343 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 SEMA4GQ9NTN9 838 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 FBXO28Q9NVF7 368 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 SH3BP4Q9P0V3 963 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 ARPP21Q9UBL0 812 aaPredicted RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 HERC5Q9UII4 1024 aaKnown RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 ASAP1Q9ULH1 1129 aa4.06□□□□□ -1.76
MALAT1-216ENST00000620465 SCAF8Q9UPN6 1271 aaKnown RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 MORC2Q9Y6X9 1032 aaPredicted RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 EIF4G1Q04637 1599 aaKnown RBP4.06□□□□□ -1.76
MALAT1-216ENST00000620465 TARM1B6A8C7 271 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 CTIFO43310 598 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 ACTL6BO94805 426 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 APEHP13798 732 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 VEGFAP15692 232 aaPredicted RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 MATN1P21941 496 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 MMP8P22894 467 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 RENBPP51606 427 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 HMGA2P52926 109 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 COPB1P53618 953 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 GPC5P78333 572 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 CFHR3Q02985 330 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 CCDC15Q0P6D6 951 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 DNASE1L3Q13609 305 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 CBFBQ13951 182 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 PRKG1Q13976 671 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 INO80DQ53TQ3 878 aaPredicted RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 ATPAF1Q5TC12 328 aaPredicted RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 TANGO2Q6ICL3 276 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 BCDIN3DQ7Z5W3 292 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 C12orf76Q8N812 135 aaPredicted RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 BOLLQ8N9W6 283 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 FAM71DQ8N9W8 422 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 MAFAQ8NHW3 353 aaPredicted RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 STT3BQ8TCJ2 826 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 REPS1Q96D71 796 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 EDC3Q96F86 508 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 HS6ST2Q96MM7 605 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 FYTTD1Q96QD9 318 aaKnown RBP4.05□□□□□ -1.76
MALAT1-216ENST00000620465 PAAF1Q9BRP4 392 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 PAGR1Q9BTK6 254 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 RIOX1Q9H6W3 641 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 SAP30LQ9HAJ7 183 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 USP29Q9HBJ7 922 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 KCNK9Q9NPC2 374 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 VPS45Q9NRW7 570 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 SERGEFQ9UGK8 458 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 PCDHB2Q9Y5E7 798 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 CC2D2AQ9P2K1 1620 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 CECR2Q9BXF3 1484 aa4.05□□□□□ -1.76
MALAT1-216ENST00000620465 PIP5K1CO60331 668 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 PRAMEF2O60811 474 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 PROP1O75360 226 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 RPP40O75818 363 aaKnown RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 CER1O95813 267 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 NUDT3O95989 172 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 MT-CO3P00414 261 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 GYS1P13807 737 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 BMP5P22003 454 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 GALNSP34059 522 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 IGHMBP2P38935 993 aaKnown RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 HALP42357 657 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 ELLP55199 621 aaPredicted RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 AP2B1P63010 937 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 RAE1P78406 368 aaKnown RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 KCNB1Q14721 858 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 ZRSR2Q15696 482 aaKnown RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 BTBD16Q32M84 506 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 TRIM60Q495X7 471 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 C4orf46Q504U0 113 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 SULT6B1Q6IMI4 303 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 NFRKBQ6P4R8 1299 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 SERPINA13PQ6UXR4 307 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 RFX8Q6ZV50 586 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 RAB11FIP2Q7L804 512 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms