RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PPCSQ9HAB8 311 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 PLLPQ9Y342 182 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 K7EPI3 171 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 P4HA1P13674 534 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 MAP4P27816 1152 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 HOXA10P31260 410 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 NFIAQ12857 509 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 NEDD8Q15843 81 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 XKR9Q5GH70 373 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 LAYNQ6UX15 382 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 DNAJC14Q6Y2X3 702 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 HELQQ8TDG4 1101 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 HEPHQ9BQS7 1158 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 TRPC7Q9HCX4 862 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 THAP1Q9NVV9 213 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 EPS15L1Q9UBC2 864 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 IP6K2Q9UHH9 426 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 PCDHB2Q9Y5E7 798 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 A0A0B4J269 797 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 TMX2-CTNND1H3BSU7 103 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 PSMD12O00232 456 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 MATN2O00339 956 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 MEIS2O14770 477 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CAPN15O75808 1086 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 GDF11O95390 407 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SMARCA1P28370 1054 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 GMPRP36959 345 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CRKP46108 304 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CDKL1Q00532 357 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SPIRE1Q08AE8 756 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 BNIP3Q12983 259 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 TFDP3Q5H9I0 405 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 KYAT3Q6YP21 454 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 CHSY1Q86X52 802 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 KATNAL2Q8IYT4 538 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 ZNF276Q8N554 614 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SMYD2Q9NRG4 433 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SEL1LQ9UBV2 794 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 MYRFQ9Y2G1 1151 aa10.09□□□□□ -0.79
TNFAIP3-210ENST00000620204 ATP8B3O60423 1300 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 GMNNO75496 209 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CYP3A4P08684 503 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CCDC130P13994 396 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 ITGAXP20702 1163 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 HMOX2P30519 316 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 SOX10P56693 466 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 NR1D2Q14995 579 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 TBCCQ15814 346 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CDO1Q16878 200 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 N4BP2L1Q5TBK1 243 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 TTC33Q6PID6 262 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 ERI1Q8IV48 349 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 MRPL46Q9H2W6 279 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 BCAP29Q9UHQ4 241 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 VPS51Q9UID3 782 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 EFR3BQ9Y2G0 817 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CNTNAP2Q9UHC6 1331 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 RNF103-CHMP3A0A140T963 221 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 A0A1W2PPW3 197 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 COX4I1P13073 169 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 XRCC1P18887 633 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CLCN2P51788 898 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 GNA12Q03113 381 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CD300CQ08708 224 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 SNAPC2Q13487 334 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 GRM2Q14416 872 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 HACE1Q8IYU2 909 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 BBS5Q8N3I7 341 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 FAM47BQ8NA70 645 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 LENG8Q96PV6 779 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CIB1Q99828 191 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 PKP2Q99959 881 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 NRDE2Q9H7Z3 1164 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 PARVAQ9NVD7 372 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 CDC14AQ9UNH5 594 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 ZNF536O15090 1300 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 FUOMA2VDF0 154 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 STAM2O75886 525 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 OXSR1O95747 527 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 NR4A1P22736 598 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 ETV4P43268 484 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 PRELPP51888 382 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 XIAPP98170 497 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 GSTM4Q03013 218 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 BTG3Q14201 252 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 HSF5Q4G112 596 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 PDCD4Q53EL6 469 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 FSCBQ5H9T9 825 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 SCARA5Q6ZMJ2 495 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 SLC15A3Q8IY34 581 aa10.08□□□□□ -0.8
TNFAIP3-210ENST00000620204 EMC1Q8N766 993 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms