RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 GTF3C6Q969F1 213 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 IQCDQ96DY2 449 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 NEK1Q96PY6 1258 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 NRDE2Q9H7Z3 1164 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 GRPEL1Q9HAV7 217 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 GALNT9Q9HCQ5 603 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 ARFGAP3Q9NP61 516 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 ZNF212Q9UDV6 495 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 TRMT112Q9UI30 125 aaKnown RBP4.98□□□□□ -1.61
SEM1-220ENST00000619259 CTNNA3Q9UI47 895 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 SHOC2Q9UQ13 582 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 SMC3Q9UQE7 1217 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 MTMR6Q9Y217 621 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 CARMIL3Q8ND23 1372 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 SCN7AQ01118 1682 aa4.98□□□□□ -1.61
SEM1-220ENST00000619259 SALL1Q9NSC2 1324 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 COL24A1Q17RW2 1714 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 NHSQ6T4R5 1651 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 MBD3L4A6NDZ8 208 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 MBD3L3A6NE82 208 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 RAB27BO00194 218 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 THAP12O43422 761 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 PFKFB2O60825 505 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 SOAT2O75908 522 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 FOSP01100 380 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 MT-ND5P03915 603 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ANXA2P07355 339 aaKnown RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 KLRC1P26715 233 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ADORA1P30542 326 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 VIPR2P41587 438 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 NPTX2P47972 431 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 NDUFV1P49821 464 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ITGA8P53708 1063 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 MAPK10P53779 464 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 GUCY1B3Q02153 619 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 EFEMP1Q12805 493 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 GRM1Q13255 1194 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 DYRK1AQ13627 763 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 CDSNQ15517 529 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ALX1Q15699 326 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 CYP2A13Q16696 494 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 BEAN1Q3B7T3 259 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ZSCAN23Q3MJ62 389 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ARL13BQ3SXY8 428 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 MGAT5BQ3V5L5 792 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 TTC39AQ5SRH9 613 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 C10orf62Q5T681 223 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 SUSD4Q5VX71 490 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ZSCAN25Q6NSZ9 544 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 HIBCHQ6NVY1 386 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 TMED8Q6PL24 325 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 ZDHHC24Q6UX98 284 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 STOX1Q6ZVD7 989 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 YAF2Q8IY57 180 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ADGRG5Q8IZF4 528 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 SDR16C5Q8N3Y7 309 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 SYAP1Q96A49 352 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 KIAA1191Q96A73 305 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 LRRC46Q96FV0 321 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 ZNF274Q96GC6 653 aaPredicted RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 MSLNLQ96KJ4 702 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 SGCZQ96LD1 299 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 NEUROD6Q96NK8 337 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 PPP1R9BQ96SB3 815 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 UTP14AQ9BVJ6 771 aaKnown RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.97□□□□□ -1.612e-8■■□□□ 11.5
SEM1-220ENST00000619259 VPS11Q9H270 941 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 CHST8Q9H2A9 424 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 SLC2A4RGQ9NR83 387 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 GJB4Q9NTQ9 266 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 TESQ9UGI8 421 aaKnown RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 TAGLN3Q9UI15 199 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 MID2Q9UJV3 735 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 MYH7P12883 1935 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 DDX60Q8IY21 1712 aaKnown RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 ZNF804BA4D1E1 1349 aa4.97□□□□□ -1.61
SEM1-220ENST00000619259 PDS5AQ29RF7 1337 aaKnown RBP4.97□□□□□ -1.61
SEM1-220ENST00000619259 DOCK2Q92608 1830 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 A0A0B4J269 797 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 A0A1W2PS29 197 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 E7ENX8 843 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 hCG_1984214I3L0E3 225 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 DCLK1O15075 740 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 TRIAP1O43715 76 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 LPXNO60711 386 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 ZFPL1O95159 310 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 SETSIPP0DME0 302 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 CPA1P15085 419 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 TSHRP16473 764 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 ABCB4P21439 1286 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 NR4A1P22736 598 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 GPTP24298 496 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 GJB2P29033 226 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 PTGS2P35354 604 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 ADD2P35612 726 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 HTR3AP46098 478 aa4.96□□□□□ -1.62
SEM1-220ENST00000619259 TOB1P50616 345 aaPredicted RBP4.96□□□□□ -1.62
SEM1-220ENST00000619259 ZNF134P52741 427 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms