RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SLX4Q8IY92 1834 aa14.34□□□□□ -0.11
CIITA-213ENST00000618327 KITP10721 976 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 BRCC3P46736 316 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 NR2C2P49116 596 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 AMPD2Q01433 879 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 ITIH5Q86UX2 942 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 PALB2Q86YC2 1186 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 UNC45BQ8IWX7 931 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 MYLPFQ96A32 169 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 FAM96AQ9H5X1 160 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 ARHGEF38Q9NXL2 777 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 APOBEC2Q9Y235 224 aaKnown RBP14.33□□□□□ -0.11
CIITA-213ENST00000618327 CACNA1SQ13698 1873 aa14.33□□□□□ -0.11
CIITA-213ENST00000618327 SDR42E2A6NKP2 422 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 RGS20O76081 388 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 ABCC13Q9NSE7 274 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 PTCH2Q9Y6C5 1203 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 TCP11X1B4DZS4 312 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 PLA2G4AP47712 749 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 PDCD2Q16342 344 aaPredicted RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 PTPN20Q4JDL3 420 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 LCLAT1Q6UWP7 414 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 SLC24A5Q71RS6 500 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 CCNJLQ8IV13 435 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 GIPC2Q8TF65 315 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 CELF6Q96J87 481 aaKnown RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 APOBEC3GQ9HC16 384 aaKnown RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 GDF3Q9NR23 364 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 NSMCE4AQ9NXX6 385 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 GTSE1Q9NYZ3 720 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 PCDHB8Q9UN66 801 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 ADAMTS5Q9UNA0 930 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 Q9Y3F1 56 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 N4BP2Q86UW6 1770 aaPredicted RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 PMM2O15305 246 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 SNAI1O95863 264 aaPredicted RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 SELPP16109 830 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 HOXD13P35453 343 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.12
CIITA-213ENST00000618327 SNX27Q96L92 541 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 SEMA4AQ9H3S1 761 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 DYRK4Q9NR20 520 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 PCMTD2Q9NV79 361 aa14.33□□□□□ -0.12
CIITA-213ENST00000618327 CLDN5O00501 218 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 INHAP05111 366 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 TTC39BQ5VTQ0 682 aaPredicted RBP14.32□□□□□ -0.12
CIITA-213ENST00000618327 ST13P4Q8IZP2 240 aaPredicted RBP14.32□□□□□ -0.12
CIITA-213ENST00000618327 COLGALT1Q8NBJ5 622 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 GRAMD1AQ96CP6 724 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 FBXL18Q96ME1 805 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 NAT9Q9BTE0 207 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 SLC24A3Q9HC58 644 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 NUDT5Q9UKK9 219 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.32□□□□□ -0.12
CIITA-213ENST00000618327 O00370 1275 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 TOMM70O94826 608 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 TRUB2O95900 331 aaKnown RBP14.32□□□□□ -0.12
CIITA-213ENST00000618327 TUBP50607 506 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 LLGL2Q6P1M3 1020 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 DDX53Q86TM3 631 aaKnown RBP14.32□□□□□ -0.12
CIITA-213ENST00000618327 XPO6Q96QU8 1125 aaKnown RBP14.32□□□□□ -0.12
CIITA-213ENST00000618327 DUSP16Q9BY84 665 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 YY1AP1Q9H869 796 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 ABCF3Q9NUQ8 709 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 TMEM191CA6NGB0 347 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 MOXD2PA6NHM9 499 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 GRAMD1BQ3KR37 738 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 HTR3CQ8WXA8 447 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 DPF3Q92784 378 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 HIPK3Q9H422 1215 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 MINDY3Q9H8M7 445 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 SLC30A1Q9Y6M5 507 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.32□□□□□ -0.12
CIITA-213ENST00000618327 ARFIP2P53365 341 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 KCNT2Q6UVM3 1135 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 POLNQ7Z5Q5 900 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 ALG3Q92685 438 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 ZNF558Q96NG5 402 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 EPN3Q9H201 632 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 NDFIP2Q9NV92 336 aa14.32□□□□□ -0.12
CIITA-213ENST00000618327 XPO1O14980 1071 aaKnown RBP14.31□□□□□ -0.12
CIITA-213ENST00000618327 AOC2O75106 756 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 FECHP22830 423 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 EDNRBP24530 442 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 INPP1P49441 399 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 RAD23BP54727 409 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 OXCT1P55809 520 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 MROH9Q5TGP6 573 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 PLEKHA7Q6IQ23 1121 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 FAM35AQ86V20 835 aa14.31□□□□□ -0.12
CIITA-213ENST00000618327 CPXM1Q96SM3 734 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms