RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TNFAIP8L3Q5GJ75 292 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 NOMO2Q5JPE7 1267 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 FNBP1LQ5T0N5 605 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 FOXR1Q6PIV2 292 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 LRRC8DQ7L1W4 858 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 CCDC13Q8IYE1 715 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 PHF24Q9UPV7 400 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 FAM189BP81408 668 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 MTM1Q13496 603 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 MSS51Q4VC12 460 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 SYCP2LQ5T4T6 812 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 CAPN12Q6ZSI9 719 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 BHLHA9Q7RTU4 235 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 ANKMY2Q8IV38 441 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 MDM1Q8TC05 714 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 BCLAF3A2AJT9 711 aaKnown RBP17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 ALOX15BO15296 676 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 MYCP01106 439 aaPredicted RBP17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 LTFP02788 710 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 ABHD2P08910 425 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 NCAM1P13591 858 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 ARL4AP40617 200 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 DSC1Q08554 894 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 NCBP2-AS2Q69YL0 99 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 THEM5Q8N1Q8 247 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 TTC25Q96NG3 672 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 SELENOSQ9BQE4 189 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 XPO7Q9UIA9 1087 aaKnown RBP17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 TCEA3O75764 348 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 SELPP16109 830 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 ZFXP17010 805 aaPredicted RBP17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 PAX3P23760 479 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 ARL4CP56559 192 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 URGCPQ8TCY9 931 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 EDEM1Q92611 657 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 RTP4Q96DX8 246 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 STMN4Q9H169 189 aaPredicted RBP17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 TBC1D13Q9NVG8 400 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 PCDHB8Q9UN66 801 aa17.99■□□□□ 0.47
PCDHGC3-205ENST00000617641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 A0A087WUV0 522 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 FOXO6A8MYZ6 492 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 TYMPP19971 482 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 OR1G1P47890 313 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 HNRNPH2P55795 449 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 TSPY1Q01534 308 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 STAT4Q14765 748 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 PSTKQ8IV42 348 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 COLGALT2Q8IYK4 626 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 BCAS4Q8TDM0 211 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 RNF139Q8WU17 664 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 VPS37BQ9H9H4 285 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 DMAP1Q9NPF5 467 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 ARHGEF4Q9NR80 690 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 DTLQ9NZJ0 730 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 DNAJB4Q9UDY4 337 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 PRG3Q9Y2Y8 225 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 TRIM17Q9Y577 477 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 ZNF638Q14966 1978 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 CREB3O43889 395 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 NBNO60934 754 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 MMP13P45452 471 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 YWHAHQ04917 246 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 RNASELQ05823 741 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 ARHGEF6Q15052 776 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 CDKL3Q8IVW4 592 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 CNOT10Q9H9A5 744 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 WDR6Q9NNW5 1121 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 ANLNQ9NQW6 1124 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 RAB6BQ9NRW1 208 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 PAK5Q9P286 719 aa17.98■□□□□ 0.47
PCDHGC3-205ENST00000617641 NLRC5Q86WI3 1866 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 AMHP03971 560 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 IVLP07476 585 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 OR4Q2P0C623 313 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 NR2C2P49116 596 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 CDK7P50613 346 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 KCNJ11Q14654 390 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 GPNMBQ14956 572 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 SLC45A4Q5BKX6 768 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 FAXCQ5TGI0 409 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 KCNT2Q6UVM3 1135 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 EXOC3L1Q86VI1 746 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 CYP4X1Q8N118 509 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 NETO2Q8NC67 525 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 CCDC110Q8TBZ0 833 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 CCDC77Q9BR77 488 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 WDR83Q9BRX9 315 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 UNC93B1Q9H1C4 597 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 DDIT4Q9NX09 232 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 RCOR3Q9P2K3 495 aaPredicted RBP17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 TBK1Q9UHD2 729 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 PTPRDP23468 1912 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 ARHGEF37A1IGU5 675 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 H3BRJ5 948 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 SEC24CP53992 1094 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 EFHC2Q5JST6 749 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 ARHGEF2Q92974 986 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms