RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 DHFR2Q86XF0 187 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 EID3Q8N140 333 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 OSCP1Q8WVF1 389 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 WDCPQ9H6R7 721 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 TOR4AQ9NXH8 423 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.17□□□□□ -1.42
RFX3-212ENST00000617270 KLK14Q9P0G3 267 aa6.17□□□□□ -1.42
RFX3-212ENST00000617270 PDS5AQ29RF7 1337 aaKnown RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 PER1O15534 1290 aaPredicted RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 RXRBP28702 533 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SCTRP47872 440 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 AP1S2P56377 157 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ATP2C1P98194 919 aaPredicted RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 EFEMP1Q12805 493 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 R3HDM1Q15032 1099 aaKnown RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 KCNV1Q6PIU1 500 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 PTAR1Q7Z6K3 402 aaPredicted RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 APLFQ8IW19 511 aaPredicted RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 RNF148Q8N7C7 305 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 DPY30Q9C005 99 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ISCUQ9H1K1 167 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 UBP1Q9NZI7 540 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 BTBD3Q9Y2F9 522 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 EFCAB10A6NFE3 127 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SNAP23O00161 211 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 EIF3DO15371 548 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFX3-212ENST00000617270 STX11O75558 287 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SEMA3DO95025 777 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ACO1P21399 889 aaKnown RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 STARP49675 285 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 DOK6Q6PKX4 331 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 MB21D2Q8IYB1 491 aaPredicted RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 KYQ8NBH2 561 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CIPCQ9C0C6 399 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ADPRHL2Q9NX46 363 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 LIMD1Q9UGP4 676 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 RBM7Q9Y580 266 aaKnown RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 ALG6Q9Y672 507 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 MAPKBP1O60336 1514 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ASXL2Q76L83 1435 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SMIM22K7EJ46 135 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TSPAN9O75954 239 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 S100A6P06703 90 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ACADMP11310 421 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FASP25445 335 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CEBPGP53567 150 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 PALB2Q86YC2 1186 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 LPCAT1Q8NF37 534 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FAM172AQ8WUF8 416 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 EMILIN2Q9BXX0 1053 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NLNQ9BYT8 704 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 GPATCH2LQ9NWQ4 482 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NCKIPSDQ9NZQ3 722 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 PCDHB2Q9Y5E7 798 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ITSN2Q9NZM3 1697 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 A0A1B0GTH6 734 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TMEM114B3SHH9 223 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 GLP2RO95838 553 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 LTFP02788 710 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ITGB3P05106 788 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FGFR3P22607 806 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FMR1Q06787 632 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFX3-212ENST00000617270 HIPK1Q86Z02 1210 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FNDC5Q8NAU1 212 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TRPV3Q8NET8 790 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NEK7Q8TDX7 302 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 PROX1Q92786 737 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NT5MQ9NPB1 228 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 MCUBQ9NWR8 336 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 RAD54BQ9Y620 910 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NCAPD2Q15021 1401 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 FAM205CA6NFA0 338 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CYP2B6P20813 491 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CASP4P49662 377 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TRAPPC11Q7Z392 1133 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 NOA1Q8NC60 698 aaKnown RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 FBXO32Q969P5 355 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ANKARQ7Z5J8 1434 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 KPNA5O15131 536 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 AP1G2O75843 785 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 GH1P01241 217 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 RBP1P09455 135 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ZNF37AP17032 561 aaPredicted RBP6.16□□□□□ -1.42
RFX3-212ENST00000617270 SCNN1BP51168 640 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CORO7P57737 925 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SCRN3Q0VDG4 424 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ITGADQ13349 1161 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 STK32CQ86UX6 486 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 SETD9Q8NE22 299 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 BBS4Q96RK4 519 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 BDH2Q9BUT1 245 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 VPS45Q9NRW7 570 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 ATAD3AQ9NVI7 634 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 VPS51Q9UID3 782 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 TFR2Q9UP52 801 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 GMEB1Q9Y692 573 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CUL7Q14999 1698 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 PALLDQ8WX93 1383 aa6.16□□□□□ -1.42
RFX3-212ENST00000617270 CCDC182A6NF36 153 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms