RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PRKAB2O43741 272 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 THP07101 528 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 TCEA1P23193 301 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 RENBPP51606 427 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 E2F4Q16254 413 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 PDZK1Q5T2W1 519 aa12.98□□□□□ -0.33
TCF4-248ENST00000616053 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 NOP53Q9NZM5 478 aaKnown RBP12.98□□□□□ -0.33
TCF4-248ENST00000616053 SUPT7LO94864 414 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 SP3Q02447 781 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 STAT4Q14765 748 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 LDAHQ9H6V9 325 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 STK39Q9UEW8 545 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PCDHGB5Q9Y5G0 923 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PHF20L1A8MW92 1017 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TMEM114B3SHH9 223 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 CCDC188H7C350 402 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 KIAA0391O15091 583 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 RAP1GAP2Q684P5 730 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 RNF19BQ6ZMZ0 732 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 SPPL2AQ8TCT8 520 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 CARMIL3Q8ND23 1372 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 ERFP50548 548 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PGBD2Q6P3X8 592 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 KLHL17Q6TDP4 642 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 EFCAB3Q8N7B9 438 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 ELMO1Q92556 727 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 CBWD1Q9BRT8 395 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 INTS2Q9H0H0 1204 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 TBC1D23Q9NUY8 699 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 NDRG2Q9UN36 371 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TRIM49P0CI25 452 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TRIM49CP0CI26 452 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 ACSM2AQ08AH3 577 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TPD52L3Q96J77 140 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 UNKQ9C0B0 810 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 SH3GLB2Q9NR46 395 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 EMSYQ7Z589 1322 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 POTEMA6NI47 508 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TM9SF1O15321 606 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PRG2P13727 222 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 RPA1P27694 616 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 BTN3A2P78410 334 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 KCNV2Q8TDN2 545 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 PROX1Q92786 737 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 MCEEQ96PE7 176 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TMEM138Q9NPI0 162 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 GMEB2Q9UKD1 530 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 A0A0J9YVX5 310 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 GMPSP49915 693 aaPredicted RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 SERPINB9P50453 376 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 FCHO2Q0JRZ9 810 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 ZNF211Q13398 564 aaPredicted RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 FAM171A1Q5VUB5 890 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 TPGS1Q6ZTW0 290 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 KRT73Q86Y46 540 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 RASAL3Q86YV0 1011 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 LPAR1Q92633 364 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 ZDHHC6Q9H6R6 413 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 NECTIN3Q9NQS3 549 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
TCF4-248ENST00000616053 SLC26A3P40879 764 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 FOXM1Q08050 763 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 SGCBQ16585 318 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 LRRC40Q9H9A6 602 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 XPR1Q9UBH6 696 aa12.97□□□□□ -0.33
TCF4-248ENST00000616053 IL1BP01584 269 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 PGM1P36871 562 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 DRAP1Q14919 205 aaPredicted RBP12.96□□□□□ -0.33
TCF4-248ENST00000616053 UBXN2BQ14CS0 331 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 XKR4Q5GH76 650 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 LRRC70Q7Z2Q7 622 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 FIBCD1Q8N539 461 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 HPS3Q969F9 1004 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 TBATAQ96M53 351 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 DUSP12Q9UNI6 340 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 PLAAQ9Y263 795 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 CYB561D2O14569 222 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 KPNA5O15131 536 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 LCA5LO95447 670 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 TYMPP19971 482 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 ITGA9Q13797 1035 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 DAB2IPQ5VWQ8 1189 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 ARHGEF19Q8IW93 802 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 CNPY4Q8N129 248 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms