RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SDR42E2A6NKP2 422 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 DAB1O75553 588 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SGPL1O95470 568 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 FGFR4P22455 802 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 IL1RL1Q01638 556 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 SETMARQ53H47 684 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 FBXO46Q6PJ61 603 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 C1orf186Q6ZWK4 172 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 TRAPPC12Q8WVT3 735 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 COPS5Q92905 334 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZSWIM1Q9BR11 485 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARHGAP39Q9C0H5 1083 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 MORF4L1Q9UBU8 362 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 NEU2Q9Y3R4 380 aa10.04□□□□□ -0.8
TNFRSF9-204ENST00000615230 TXNDC9O14530 226 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 HNRNPRO43390 633 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 OPHN1O60890 802 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 FAM163BP0C2L3 166 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 STMN1P16949 149 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 LRRC8EQ6NSJ5 796 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 BLOC1S5Q8TDH9 187 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 WFIKKN2Q8TEU8 576 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 STARD8Q92502 1023 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 CYLDQ9NQC7 956 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 ESRRAP11474 423 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC8A1P32418 973 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 ACLYP53396 1101 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRB14Q14449 540 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 CACHD1Q5VU97 1274 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SETD3Q86TU7 594 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 MYLPFQ96A32 169 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 POLR1EQ9GZS1 481 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 ATP13A3Q9H7F0 1226 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 TEX33O43247 280 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 ALPPL2P10696 532 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 RBP3P10745 1247 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 NR1D1P20393 614 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 INPP1P49441 399 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 USP4Q13107 963 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 CNGA2Q16280 664 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 KIAA1324Q6UXG2 1013 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 PPWD1Q96BP3 646 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 CARD9Q9H257 536 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 RMND5AQ9H871 391 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 ACTR5Q9H9F9 607 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRID1Q9ULK0 1009 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 HNRNPCL2B2RXH8 293 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 DNAJC8O75937 253 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SNRPAP09012 282 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 PRKAA2P54646 552 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 POU4F1Q01851 419 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 NFIL3Q16649 462 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SEZ6Q53EL9 994 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SCARA3Q6AZY7 606 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 MMGT1Q8N4V1 131 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC2A14Q8TDB8 520 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 RXFP2Q8WXD0 754 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 TMEM159Q96B96 161 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 WWP1Q9H0M0 922 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 KIF17Q9P2E2 1029 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 DCDC2Q9UHG0 476 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 SNX12Q9UMY4 172 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 AGTP01019 485 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 RBP1P09455 135 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRSF1Q12849 480 aaKnown RBP eCLIP10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 GPM6BQ13491 265 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 CAPSQ13938 189 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 OTOP3Q7RTS5 596 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 NT5DC3Q86UY8 548 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 C12orf56Q8IXR9 622 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 PLD4Q96BZ4 506 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 TMEM237Q96Q45 408 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 TMEM161AQ9NX61 479 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 HPSEQ9Y251 543 aa10.03□□□□□ -0.8
TNFRSF9-204ENST00000615230 PEAK1Q9H792 1746 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 TTC36A6NLP5 189 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 ERI2A8K979 691 aaKnown RBP10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 SMPD1P17405 629 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 BDNFP23560 247 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 CYP2F1P24903 491 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 STRADAQ7RTN6 431 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 UBE2E3Q969T4 207 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 NRBF2Q96F24 287 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 CDT1Q9H211 546 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 MAFFQ9ULX9 164 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 SQORQ9Y6N5 450 aa10.02□□□□□ -0.8
TNFRSF9-204ENST00000615230 F8VZ95 297 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 H3BM21 787 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 MMEP08473 750 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 CXCR2P25025 360 aa10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 HP1BP3Q5SSJ5 553 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF9-204ENST00000615230 RNF135Q8IUD6 432 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms