RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA4-202ENST00000612927 NRCAMQ92823 1304 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 STAU1O95793 577 aaKnown RBP13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 KRT7P08729 469 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 VDRP11473 427 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 CYP2C9P11712 490 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 GPD2P43304 727 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MMRN1Q13201 1228 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MFSD10Q14728 455 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 HADHQ16836 314 aaKnown RBP13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 OTOAQ7RTW8 1153 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MTDHQ86UE4 582 aaKnown RBP13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 RFX6Q8HWS3 928 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 ARHGAP24Q8N264 748 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MCUR1Q96AQ8 359 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 SNX27Q96L92 541 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MIS12Q9H081 205 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 TRABDQ9H4I3 376 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 PPCSQ9HAB8 311 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 TUBGCP4Q9UGJ1 667 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 CITO14578 2027 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 GYG2O15488 501 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 HAUS5O94927 633 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MAGEA8P43361 318 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 CDO1Q16878 200 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 KCTD6Q8NC69 237 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 MIPOL1Q8TD10 442 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 FNIP1Q8TF40 1166 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 DOCK3Q8IZD9 2030 aa13.11□□□□□ -0.31
PCDHGA4-202ENST00000612927 SMIM35A0A1B0GVV1 85 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 TCRBV7S3A2A0A539 114 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 DARSP14868 501 aaKnown RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 RGS7P49802 495 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 ZNF200P98182 395 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 LSAMPQ13449 338 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 C15orf59Q2T9L4 293 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 GLRA4Q5JXX5 417 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 NPNTQ6UXI9 565 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 DNAJB3Q8WWF6 145 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 CPT1BQ92523 772 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 C18orf25Q96B23 403 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 MCRS1Q96EZ8 462 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 KRT82Q9NSB4 513 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 GRID1Q9ULK0 1009 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 SHOC2Q9UQ13 582 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 E5RJQ4 531 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 HMGCRP04035 888 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 CDK7P50613 346 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 BEX3Q00994 111 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 HIF1AQ16665 826 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 C4orf33Q8N1A6 199 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 TMEM40Q8WWA1 233 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 WDR83Q9BRX9 315 aaKnown RBP13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 TBC1D30Q9Y2I9 924 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 GMEB1Q9Y692 573 aa13.1□□□□□ -0.31
PCDHGA4-202ENST00000612927 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 F8W8V4 182 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 DNAJC6O75061 913 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 TMEM63AO94886 807 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 CYP2B6P20813 491 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 GABRB2P47870 512 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 PSEN2P49810 448 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RASA2Q15283 850 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 FNBP1LQ5T0N5 605 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 NOTUMQ6P988 496 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RINLQ6ZS11 566 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 CENPUQ71F23 418 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 LZICQ8WZA0 190 aa13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 ZNF75CPQ92670 426 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA4-202ENST00000612927 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms