RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 ELF4Q99607 663 aaPredicted RBP7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 PYM1Q9BRP8 204 aaKnown RBP7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 RAB34Q9BZG1 259 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 RPF1Q9H9Y2 349 aaKnown RBP7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 POLR1BQ9H9Y6 1135 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 LRRC4CQ9HCJ2 640 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 TRPM5Q9NZQ8 1165 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 LRWD1Q9UFC0 647 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ATP6V1DQ9Y5K8 247 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 STON1Q9Y6Q2 735 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 MORC2Q9Y6X9 1032 aaPredicted RBP7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CKAP5Q14008 2032 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ITPR3Q14573 2671 aa7.64□□□□□ -1.19
PTCHD3P1-201ENST00000612350 FBN2P35556 2912 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ITPR2Q14571 2701 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CLDN3O15551 220 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 FAM189A1O60320 539 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CACNG3O60359 315 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 TSPAN3O60637 253 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 OR52Z1P0C646 297 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CISD3P0C7P0 127 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 FAM87AP0C7U9 286 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ZSCAN22P10073 491 aaPredicted RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 MUTP22033 750 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CD27P26842 260 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ACSL1P33121 698 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ZNF132P52740 706 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 COPAP53621 1224 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 NUCB2P80303 420 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 E2F1Q01094 437 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 TSPY1Q01534 308 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 PPP2R3AQ06190 1150 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ZNF174Q15697 407 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ANO4Q32M45 955 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CFAP221Q4G0U5 840 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 JADE1Q6IE81 842 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 IGF2-ASQ6U949 168 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 KANSL1Q7Z3B3 1105 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 BBS7Q8IWZ6 715 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 KCTD17Q8N5Z5 321 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SCFD1Q8WVM8 642 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 PRCCQ92733 491 aaPredicted RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 EXTL1Q92935 676 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 DRC1Q96MC2 740 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ZNF396Q96N95 335 aaPredicted RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 DUSP9Q99956 384 aaKnown RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ACBD6Q9BR61 282 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 NTPCRQ9BSD7 190 aaKnown RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 TRIM9Q9C026 710 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 KMT5AQ9NQR1 393 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 THSD1Q9NS62 852 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 DNAJC17Q9NVM6 304 aaKnown RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 PLEKHB1Q9UF11 243 aaPredicted RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 GTF3C4Q9UKN8 822 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 RBM19Q9Y4C8 960 aaKnown RBP7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 RELNP78509 3460 aa7.63□□□□□ -1.19
PTCHD3P1-201ENST00000612350 PLXNA2O75051 1894 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 A0A1W2PNU3 283 aaPredicted RBP7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 RNF223E7ERA6 249 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 WNT7AO00755 349 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SLC16A4O15374 487 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SLC26A4O43511 780 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 USP12O75317 370 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 F13A1P00488 732 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 WNT1P04628 370 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ITGB2P05107 769 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SFTPCP11686 197 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ACO1P21399 889 aaKnown RBP7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ABCB4P21439 1286 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ACAT1P24752 427 aaKnown RBP7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 RPA1P27694 616 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 EPHA8P29322 1005 aaPredicted RBP7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 MAGEA11P43364 429 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 PPP3CCP48454 512 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 TAF6P49848 677 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ASIC1P78348 528 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 GRIN1Q05586 938 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 BNIP3Q12983 259 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 MAPK7Q13164 816 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CLN3Q13286 438 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 STARD3Q14849 445 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ECM1Q16610 540 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 INTS6LQ5JSJ4 861 aaKnown RBP7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SFMBT2Q5VUG0 894 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 HAUS3Q68CZ6 603 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ZPBP2Q6X784 338 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 DTHD1Q6ZMT9 781 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 FAM124AQ86V42 546 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 DDX42Q86XP3 938 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SCN4BQ8IWT1 228 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 C4orf32Q8N8J7 132 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 ERMNQ8TAM6 284 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 WBP2Q969T9 261 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SPATA17Q96L03 361 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 SLC46A1Q96NT5 459 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 TTLL2Q9BWV7 592 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 EPN3Q9H201 632 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 BHMT2Q9H2M3 363 aa7.62□□□□□ -1.19
PTCHD3P1-201ENST00000612350 CFAP45Q9UL16 551 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms