RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RIPK2O43353 540 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SMIM24O75264 130 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ASMTLO95671 621 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 AVPR1AP37288 418 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 EPHB3P54753 998 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ALDH18A1P54886 795 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CSE1LP55060 971 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ARHGAP1Q07960 439 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 FOXD4Q12950 439 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 IKBKEQ14164 716 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ACAP1Q15027 740 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SLC10A6Q3KNW5 377 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 RABGAP1LQ5R372 815 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF662Q6ZS27 426 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 RIBC1Q8N443 379 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CCDC124Q96CT7 223 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 FICDQ9BVA6 458 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MINDY3Q9H8M7 445 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 APOBEC3GQ9HC16 384 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 OR12D3Q9UGF7 316 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 AJAP1Q9UKB5 411 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 GRID1Q9ULK0 1009 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SHOC2Q9UQ13 582 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 NAALADL1Q9UQQ1 740 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 AAR2Q9Y312 384 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 USP15Q9Y4E8 981 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 COL1A2P08123 1366 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 RNF103O00237 685 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SPTLC1O15269 473 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 PIAS1O75925 651 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 RHOCP08134 193 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CHRM3P20309 590 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 OR1E1P30953 314 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 OXCT1P55809 520 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MARC1Q5VT66 337 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 LRRC34Q8IZ02 419 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CALML6Q8TD86 181 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 GPR152Q8TDT2 470 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MYLPFQ96A32 169 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 DCUN1D1Q96GG9 259 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SEC16BQ96JE7 1060 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MRPL9Q9BYD2 267 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 WWP1Q9H0M0 922 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 LRRC40Q9H9A6 602 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CHST12Q9NRB3 414 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 C4BP0C0L5 1744 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 LOC102724159A0A0B4J2E5 919 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 RAMP2O60895 175 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 IL1RL1Q01638 556 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ARHGEF7Q14155 803 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 PWP2Q15269 919 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 IMPG1Q17R60 797 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 THEMIS2Q5TEJ8 643 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 SPATA24Q86W54 205 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ARID3BQ8IVW6 561 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 AENQ8WTP8 325 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 NDRG1Q92597 394 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ERP27Q96DN0 273 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 PWWP2AQ96N64 755 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 SERPINB11Q96P15 392 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 SHCBP1LQ9BZQ2 653 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ECT2Q9H8V3 914 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 GDF3Q9NR23 364 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 IARS2Q9NSE4 1012 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 RRN3Q9NYV6 651 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 COG5Q9UP83 839 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 BTNL10A8MVZ5 291 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 RBAK-RBAKDNI3L0D1 243 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 MEFVO15553 781 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 SEPT4O43236 478 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 CA12O43570 354 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 FLT3P36888 993 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 HADHAP40939 763 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 GLRBP48167 497 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 IFI35P80217 286 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 CHI3L2Q15782 390 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 DDR2Q16832 855 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 PTRHD1Q6GMV3 140 aaKnown RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ANGPTL8Q6UXH0 198 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 NPLOC4Q8TAT6 608 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 E2F7Q96AV8 911 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 FZD8Q9H461 694 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 FAM96AQ9H5X1 160 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 SIX2Q9NPC8 291 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 CDH9Q9ULB4 789 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 GIT1Q9Y2X7 761 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TMEM191CA6NGB0 347 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 GOLGA8TH3BQL2 631 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 FAM107AO95990 144 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 OR4Q2P0C623 313 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 KLRC2P26717 231 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TUSC3Q13454 348 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ARHGAP15Q53QZ3 475 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TIGD7Q6NT04 549 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-218ENST00000610726 ILDR2Q71H61 639 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 IFNL1Q8IU54 200 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 TFAP2BQ92481 460 aa7.5□□□□□ -1.21
CSDE1-218ENST00000610726 FAM161BQ96MY7 647 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms