RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 WDR75Q8IWA0 830 aaKnown RBP12.35□□□□□ -0.43
TP53-220ENST00000610623 SHKBP1Q8TBC3 707 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 TRPC4APQ8TEL6 797 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 RIT2Q99578 217 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 WDR83Q9BRX9 315 aaKnown RBP12.35□□□□□ -0.43
TP53-220ENST00000610623 TMEM121Q9BTD3 319 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 MKS1Q9NXB0 559 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 TMED5Q9Y3A6 229 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 PCDHB2Q9Y5E7 798 aa12.35□□□□□ -0.43
TP53-220ENST00000610623 TRIM43BA6NCK2 446 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 TMEM247A6NEH6 219 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 BOLA2-SMG1P6H3BVE0 249 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 MATN2O00339 956 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ZBTB39O15060 712 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 PROCP04070 461 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 KITP10721 976 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 KRT5P13647 590 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 DNAJB2P25686 324 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 GJC1P36383 396 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 NUP107P57740 925 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 MAMLD1Q13495 774 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 DCAF15Q66K64 600 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 POTEHQ6S545 545 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 CMTM5Q96DZ9 223 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 MXRA8Q9BRK3 442 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ZNF577Q9BSK1 485 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.43
TP53-220ENST00000610623 TDRKHQ9Y2W6 561 aaKnown RBP12.34□□□□□ -0.43
TP53-220ENST00000610623 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 CFAP99D6REC4 459 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ITM2AO43736 263 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 KRT37O76014 449 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 NUDT7P0C024 238 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 MYL4P12829 197 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 HOXD12P35452 270 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 GCNT1Q02742 428 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 SYCP2LQ5T4T6 812 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 LGSNQ5TDP6 509 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ANKRD22Q5VYY1 191 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 PLEKHA7Q6IQ23 1121 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 MFSD7Q6UXD7 560 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 SPOCD1Q6ZMY3 1216 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ARCQ7LC44 396 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 ADCY4Q8NFM4 1077 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 SLC35B2Q8TB61 432 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 MECRQ9BV79 373 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
TP53-220ENST00000610623 OSBPL6Q9BZF3 934 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 THAP1Q9NVV9 213 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 RRN3Q9NYV6 651 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
TP53-220ENST00000610623 SQORQ9Y6N5 450 aa12.34□□□□□ -0.43
TP53-220ENST00000610623 A0A0B4J269 797 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 PI4K2BG5E9Z4 385 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 TLR3O15455 904 aaKnown RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 KRT1P04264 644 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 ALDH2P05091 517 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 ZNF23P17027 643 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 GMPSP49915 693 aaPredicted RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 TUBB3Q13509 450 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 ELOAQ14241 798 aaKnown RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 ZFYVE27Q5T4F4 411 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 IYDQ6PHW0 289 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 B3GNT9Q6UX72 402 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 CDHR3Q6ZTQ4 885 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 DAW1Q8N136 415 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 DHX38Q92620 1227 aaKnown RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 CCDC124Q96CT7 223 aaKnown RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 CNBD2Q96M20 576 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 LRGUKQ96M69 825 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 HNRNPABQ99729 332 aaKnown RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 EBF4Q9BQW3 602 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 FAM96AQ9H5X1 160 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 SLC38A10Q9HBR0 1119 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 MARCOQ9UEW3 520 aaPredicted RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 ZNF180Q9UJW8 692 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 APPL1Q9UKG1 709 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 hCG_1818297A0A087WSY0 165 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 TISP43B9A030 160 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 SERPINB7O75635 380 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 ZBED1O96006 694 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 SNRPAP09012 282 aaKnown RBP12.33□□□□□ -0.44
TP53-220ENST00000610623 RELAQ04206 551 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 GAD2Q05329 585 aa12.33□□□□□ -0.44
TP53-220ENST00000610623 STX3Q13277 289 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms