RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 NCAM1P13591 858 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 TIE1P35590 1138 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 CHKAP35790 457 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 GRIA2P42262 883 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 COPB1P53618 953 aaKnown RBP16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 BPIFB4P59827 614 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 PDCLQ13371 301 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 MEA1Q16626 185 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 C10orf76Q5T2E6 689 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 Q6ZNB5 142 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 PRR23BQ6ZRT6 265 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 SLC47A2Q86VL8 602 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 SCUBE3Q8IX30 993 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 IPO4Q8TEX9 1081 aaKnown RBP16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 HHIPQ96QV1 700 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 TRIM62Q9BVG3 475 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 FAM207AQ9NSI2 230 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 POLR3BQ9NW08 1133 aaPredicted RBP16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 PLK2Q9NYY3 685 aa16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 HBS1LQ9Y450 684 aaKnown RBP16.58■□□□□ 0.24
PPFIA4-213ENST00000601609 GABBR2O75899 941 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 PAPSS2O95340 614 aaPredicted RBP16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 KLKB1P03952 638 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 UCHL3P15374 230 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 PXNP49023 591 aaPredicted RBP16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 KLK7P49862 253 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 DMWDQ09019 674 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 DMC1Q14565 340 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 LONP2Q86WA8 852 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 CCDC33Q8N5R6 958 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 ZBTB44Q8NCP5 570 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 C1orf131Q8NDD1 294 aaKnown RBP16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 STK32AQ8WU08 396 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 PLCB1Q9NQ66 1216 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 AGO1Q9UL18 857 aaKnown RBP16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 RAB23Q9ULC3 237 aa16.57■□□□□ 0.24
PPFIA4-213ENST00000601609 K7EQS6 105 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 K7ESF4 209 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 KLF8O95600 359 aaPredicted RBP16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 TDGF1P13385 188 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 PTMSP20962 102 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 CLCN1P35523 988 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 DGKGP49619 791 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 TBX4P57082 545 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 SNX16P57768 344 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 POLR2FP61218 127 aaKnown RBP16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 UBXN1Q04323 297 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 MSANTD2Q6P1R3 559 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 CEP68Q76N32 757 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 SFTPA1Q8IWL2 248 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 ETFBKMTQ8IXQ9 262 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 TERB1Q8NA31 727 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 TSTD1Q8NFU3 115 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 USP33Q8TEY7 942 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 DDI1Q8WTU0 396 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 PPP1R13BQ96KQ4 1090 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 SPAG5Q96R06 1193 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 MARK1Q9P0L2 795 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 NCDNQ9UBB6 729 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 CYTH4Q9UIA0 394 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 PCDHGC3Q9UN70 934 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 KIAA1549LQ6ZVL6 1849 aa16.56■□□□□ 0.24
PPFIA4-213ENST00000601609 FAM170AA1A519 330 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 TRIM24O15164 1050 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 PAPSS1O43252 624 aaPredicted RBP16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 CACNG3O60359 315 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 HOXC13P31276 330 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 MRPS21P82921 87 aaKnown RBP16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 MESP2Q0VG99 397 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 SYCP1Q15431 976 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 TRIP4Q15650 581 aaPredicted RBP16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 LPAL2Q16609 132 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 OR6B2Q6IFH4 312 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 SYT13Q7L8C5 426 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 FAM71AQ8IYT1 594 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 ALLCQ8N6M5 410 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 NELL1Q92832 810 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 SERPINB11Q96P15 392 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 ZDHHC4Q9NPG8 344 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 LIMA1Q9UHB6 759 aaKnown RBP16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 SMG5Q9UPR3 1016 aaKnown RBP16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 NAALADL1Q9UQQ1 740 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 FANCMQ8IYD8 2048 aa16.55■□□□□ 0.24
PPFIA4-213ENST00000601609 ANTXRLA6NF34 631 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 F8VZ95 297 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 TSPAN3O60637 253 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 LILRB5O75023 590 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 GFPT2O94808 682 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 APBB3O95704 486 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 CYP11B1P15538 503 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 TNFRSF4P43489 277 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 SLC11A2P49281 568 aa16.54■□□□□ 0.24
PPFIA4-213ENST00000601609 SRSF5Q13243 272 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms