RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 AK5Q9Y6K8 562 aa14.72□□□□□ -0.05
SHKBP1-218ENST00000598907 PTPN13Q12923 2485 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 TBC1D3BA6NDS4 549 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 ZNF233A6NK53 670 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 KCNJ18B7U540 433 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 GOLGA6L19H0YKK7 550 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 ADH1CP00326 375 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 EPB41P11171 864 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 EIF2DP41214 584 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 RPL10AP62906 217 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 TSPY1Q01534 308 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 CYP24A1Q07973 514 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 KCNJ12Q14500 433 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 CCDC142Q17RM4 750 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 HLA-BQ31612 363 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 TRMT11Q7Z4G4 463 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 BRSK2Q8IWQ3 736 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 TRIM59Q8IWR1 403 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 SCN4BQ8IWT1 228 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 NAT16Q8N8M0 369 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 RDH13Q8NBN7 331 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 PLEKHO2Q8TD55 490 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 BAP1Q92560 729 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 FOXJ1Q92949 421 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 ZNF419Q96HQ0 510 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 SEMA4CQ9C0C4 833 aa14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-218ENST00000598907 SCN1AP35498 2009 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 A0A1W2PQF6 199 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 SLC28A2O43868 658 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 ZNF883P0CG24 379 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 ATP1A3P13637 1013 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 ACAT1P24752 427 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 TNFRSF4P43489 277 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 WNT7BP56706 349 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 TPM4P67936 248 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 CLDN10P78369 228 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 BNC1Q01954 994 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 SRSF1Q07955 248 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 CCDC173Q0VFZ6 552 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 PSMD6Q15008 389 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 HSP90AA4PQ58FG1 418 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 C1orf220Q5T0J3 134 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 C6orf118Q5T5N4 469 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 INTS8Q75QN2 995 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 MIB1Q86YT6 1006 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 FMNL3Q8IVF7 1028 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 TMC2Q8TDI7 906 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 PARD3BQ8TEW8 1205 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 RPF1Q9H9Y2 349 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 ARMCX3Q9UH62 379 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 RAD54BQ9Y620 910 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 PIEZO2Q9H5I5 2752 aa14.7□□□□□ -0.06
SHKBP1-218ENST00000598907 ATMQ13315 3056 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 E9PAM4 449 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 PIRO00625 290 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 WISP1O95388 367 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 KRT10P13645 584 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 TCF3P15923 654 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 NTSR1P30989 418 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 TAF6P49848 677 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 GSE1Q14687 1217 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 KRT31Q15323 416 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 CCDC40Q4G0X9 1142 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 EGFLAMQ63HQ2 1017 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 RHBDF2Q6PJF5 856 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 ADGRG2Q8IZP9 1017 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 PHTF2Q8N3S3 785 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 IPO4Q8TEX9 1081 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 MYRFLQ96LU7 910 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 ACOX2Q99424 681 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 RBAKQ9NYW8 714 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 CFAP97Q9P2B7 532 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 MAGEC2Q9UBF1 373 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 CPQQ9Y646 472 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 MYOFQ9NZM1 2061 aa14.69□□□□□ -0.06
SHKBP1-218ENST00000598907 ERVH48-1M5A8F1 160 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 TNFSF14O43557 240 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 NCAM1P13591 858 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 VAMP7P51809 220 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 LY6DQ14210 128 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 TMEM132DQ14C87 1099 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 SURF1Q15526 300 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 NFE2Q16621 373 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 PREPLQ4J6C6 727 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 MIIPQ5JXC2 388 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 LY6G5CQ5SRR4 150 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 CD302Q8IX05 232 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 CHPFQ8IZ52 775 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 SLC35C1Q96A29 364 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 TOE1Q96GM8 510 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 TUBGCP2Q9BSJ2 902 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 GPR174Q9BXC1 333 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 ASB7Q9H672 318 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 GMIPQ9P107 970 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 MGAQ8IWI9 3026 aa14.68□□□□□ -0.06
SHKBP1-218ENST00000598907 MYO18AQ92614 2054 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 A0A1B0GVT2 93 aa14.67□□□□□ -0.06
SHKBP1-218ENST00000598907 ANO9A1A5B4 782 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms