RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 HAPLN1P10915 354 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 LCP1P13796 627 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 ATF2P15336 505 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 PFKPQ01813 784 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 FOXC1Q12948 553 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 DUSP4Q13115 394 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 PLD1Q13393 1074 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 CYP4A22Q5TCH4 519 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 PMF1Q6P1K2 205 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 DNAJC24Q6P3W2 148 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 TPRG1Q6ZUI0 275 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 WDTC1Q8N5D0 677 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 C18orf8Q96DM3 657 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 C8orf48Q96LL4 319 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 BBC3Q96PG8 261 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 KCNK16Q96T55 309 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 SCNM1Q9BWG6 230 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 PACSIN1Q9BY11 444 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 THAP2Q9H0W7 228 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 IGSF5Q9NSI5 407 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 CNOT8Q9UFF9 292 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 CYTH4Q9UIA0 394 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC27A5Q9Y2P5 690 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 SCINQ9Y6U3 715 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 PTPRDP23468 1912 aa12.64□□□□□ -0.39
SHKBP1-213ENST00000597325 NCANO14594 1321 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 PIK3R2O00459 728 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 BEST1O76090 585 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 FBXO21O94952 628 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ERBB2P04626 1255 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ALDH1A3P47895 512 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 TKTL1P51854 596 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ADIGQ0VDE8 80 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 SRSF5Q13243 272 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 VEPH1Q14D04 833 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 OR6B2Q6IFH4 312 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 DNAAF5Q86Y56 855 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ZDHHC17Q8IUH5 632 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 FAM160A2Q8N612 972 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 HDAC7Q8WUI4 952 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 CEP295NLQ96MC4 621 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC4A5Q9BY07 1137 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 TRMT1Q9NXH9 659 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 CTTNBP2NLQ9P2B4 639 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 GPSM3Q9Y4H4 160 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 YIPF1Q9Y548 306 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 SDK1Q7Z5N4 2213 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
SHKBP1-213ENST00000597325 GOLGA8SH3BPF8 625 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 SART1O43290 800 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 TGM5O43548 720 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 VNN2O95498 520 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 RRM1P23921 792 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 CNR2P34972 360 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 GABRB2P47870 512 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC5A3P53794 718 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 NAP1L1P55209 391 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 ZNF252P-AS1Q0IIN9 211 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 IFRD2Q12894 506 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 PPP2R5DQ14738 602 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 TAF12Q16514 161 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 C2CD6Q53TS8 623 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 FAM102AQ5T9C2 384 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 ZNF852Q6ZMS4 543 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 FAM183BPQ6ZVS7 135 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 TMEM110Q86TL2 294 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 RHOT2Q8IXI1 618 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 TCEAL8Q8IYN2 117 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 C3orf20Q8ND61 904 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 KIAA1524Q8TCG1 905 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 RFFLQ8WZ73 363 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 GOLGA1Q92805 767 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 SPATA17Q96L03 361 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 SELENOOQ9BVL4 669 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 CRISPLD1Q9H336 500 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 MRPL47Q9HD33 250 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 LZTFL1Q9NQ48 299 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 AVENQ9NQS1 362 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 TMEM30AQ9NV96 361 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 PARVAQ9NVD7 372 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 DPP7Q9UHL4 492 aa12.62□□□□□ -0.39
SHKBP1-213ENST00000597325 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms