RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CEP68Q76N32 757 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 C11orf74Q86VG3 221 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 PHTF2Q8N3S3 785 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 CPXM2Q8N436 756 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 ENOX1Q8TC92 643 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 GPT2Q8TD30 523 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 GAB3Q8WWW8 586 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 IRX2Q9BZI1 471 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 DNAJC17Q9NVM6 304 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 C2orf42Q9NWW7 574 aa18.55■□□□□ 0.56
SHKBP1-204ENST00000594862 AXIN1O15169 862 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 LRP3O75074 770 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 RPP40O75818 363 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 ALDH1A2O94788 518 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 LTFP02788 710 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 USP8P40818 1118 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 GPD2P43304 727 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 RPL34P49207 117 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 SEC13P55735 322 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 SNX16P57768 344 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 BPIFB4P59827 614 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 PTK2Q05397 1052 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 DMWDQ09019 674 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 TRIP4Q15650 581 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 ARHGAP44Q17R89 818 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 BEND5Q7L4P6 421 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 FMNL3Q8IVF7 1028 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 NAT16Q8N8M0 369 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 ZNF606Q8WXB4 792 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 NOX5Q96PH1 765 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 POLMQ9NP87 494 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 ANO10Q9NW15 660 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 NFE2L3Q9Y4A8 694 aa18.54■□□□□ 0.56
SHKBP1-204ENST00000594862 PES1O00541 588 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 FOXD2O60548 495 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 KLKB1P03952 638 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 HMBSP08397 361 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 KIR2DL1P43626 348 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 DGKGP49619 791 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 STX1AQ16623 288 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 OTOGLQ3ZCN5 2332 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 TCP11X2Q5H9J9 407 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 C10orf76Q5T2E6 689 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 NUGGCQ68CJ6 796 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 TPGS1Q6ZTW0 290 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 DENND1CQ8IV53 801 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 FAM217AQ8IXS0 508 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 ANKRD20A12PQ8NF67 263 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 EDEM1Q92611 657 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 HHIPQ96QV1 700 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 DNAJC12Q9UKB3 198 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 AGO1Q9UL18 857 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 STARD13Q9Y3M8 1113 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 CEP83Q9Y592 693 aa18.53■□□□□ 0.56
SHKBP1-204ENST00000594862 HRO43593 1189 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 KLF8O95600 359 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 PENKP01210 267 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 RETP07949 1114 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 RING1Q06587 406 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 NNTQ13423 1086 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 CRY1Q16526 586 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 MIIPQ5JXC2 388 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 CCDC183Q5T5S1 534 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 CACNA2D4Q7Z3S7 1137 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 UNC45BQ8IWX7 931 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 ALLCQ8N6M5 410 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 ZNF513Q8N8E2 541 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 IL17RCQ8NAC3 791 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 LOXL4Q96JB6 756 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 SERPINB11Q96P15 392 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 SLC4A5Q9BY07 1137 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 SLC2A11Q9BYW1 496 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 PCDHGC3Q9UN70 934 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 DAAM1Q9Y4D1 1078 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 MYOFQ9NZM1 2061 aa18.52■□□□□ 0.56
SHKBP1-204ENST00000594862 BECN2A8MW95 431 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 NPC1O15118 1278 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 TIE1P35590 1138 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 MPPE1Q53F39 396 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 SDE2Q6IQ49 451 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 DENND1BQ6P3S1 775 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 GJB7Q6PEY0 223 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 TMEM110Q86TL2 294 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 RASSF3Q86WH2 238 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 CCDC33Q8N5R6 958 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 ZNF557Q8N988 423 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 TXNDC5Q8NBS9 432 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 NDRG1Q92597 394 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 DDX50Q9BQ39 737 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 MIS12Q9H081 205 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 LHX5Q9H2C1 402 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 SIX2Q9NPC8 291 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 SAMSN1Q9NSI8 373 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 STOML2Q9UJZ1 356 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 SLC27A6Q9Y2P4 619 aa18.51■□□□□ 0.55
SHKBP1-204ENST00000594862 CEP250Q9BV73 2442 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 ZBTB24O43167 697 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 ID4P47928 161 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms