RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ITPKAP23677 461 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 TKTL1P51854 596 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 PMS1P54277 932 aaKnown RBP18.82■□□□□ 0.6
CIRBP-243ENST00000593128 YWHAGP61981 247 aaKnown RBP eCLIP18.82■□□□□ 0.6
CIRBP-243ENST00000593128 COG7P83436 770 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 KIAA1211LQ6NV74 962 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 KIAA1324Q6UXG2 1013 aaKnown RBP18.82■□□□□ 0.6
CIRBP-243ENST00000593128 Q6ZNB5 142 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 DENND1CQ8IV53 801 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 ARHGAP18Q8N392 663 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 IPO4Q8TEX9 1081 aaKnown RBP18.82■□□□□ 0.6
CIRBP-243ENST00000593128 NUSAP1Q9BXS6 441 aaKnown RBP18.82■□□□□ 0.6
CIRBP-243ENST00000593128 FSCN3Q9NQT6 498 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 TMEM74BQ9NUR3 256 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 CLIC5Q9NZA1 410 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 MARCH2Q9P0N8 246 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 CYP8B1Q9UNU6 501 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 USP3Q9Y6I4 520 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 PLXND1Q9Y4D7 1925 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 A0A1W2PQF6 199 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 TULP2O00295 520 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 SLC16A3O15427 465 aaKnown RBP18.81■□□□□ 0.6
CIRBP-243ENST00000593128 AP5Z1O43299 807 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 NDUFV2P19404 249 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 FKBP3Q00688 224 aaKnown RBP18.81■□□□□ 0.6
CIRBP-243ENST00000593128 CUL2Q13617 745 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 BECN1Q14457 450 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 SH3PXD2AQ5TCZ1 1133 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 ARHGAP17Q68EM7 881 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 SYT12Q8IV01 421 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 ANKRD52Q8NB46 1076 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 UBA3Q8TBC4 463 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 GSDMAQ96QA5 445 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 GTPBP2Q9BX10 602 aaKnown RBP18.81■□□□□ 0.6
CIRBP-243ENST00000593128 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 HESX1Q9UBX0 185 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 ARMCX3Q9UH62 379 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-243ENST00000593128 HOOK1Q9UJC3 728 aaKnown RBP18.81■□□□□ 0.6
CIRBP-243ENST00000593128 ZNF510Q9Y2H8 683 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 STARD13Q9Y3M8 1113 aa18.81■□□□□ 0.6
CIRBP-243ENST00000593128 ADAMTS9Q9P2N4 1935 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 WASH3PC4AMC7 463 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 ZBED1O96006 694 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 CYBBP04839 570 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 CISD3P0C7P0 127 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 PDE4CQ08493 712 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 ST3GAL2Q16842 350 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 SGO2Q562F6 1265 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 SLC36A4Q6YBV0 504 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 IPO9Q96P70 1041 aaKnown RBP18.8■□□□□ 0.6
CIRBP-243ENST00000593128 DCLK3Q9C098 648 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 TSPAN16Q9UKR8 245 aa18.8■□□□□ 0.6
CIRBP-243ENST00000593128 AGO1Q9UL18 857 aaKnown RBP18.8■□□□□ 0.6
CIRBP-243ENST00000593128 NDUFS2O75306 463 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 ENGP17813 658 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 CHKAP35790 457 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 ATXN3P54252 364 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-243ENST00000593128 BCAT1P54687 386 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 YWHAEP62258 255 aaKnown RBP18.79■□□□□ 0.6
CIRBP-243ENST00000593128 ZNF252P-AS1Q0IIN9 211 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 ADIGQ0VDE8 80 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 LMAN2Q12907 356 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 STIM1Q13586 685 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 KLHL10Q6JEL2 608 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 SIX6OS1Q8N1H7 587 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 DDI1Q8WTU0 396 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 RNF139Q8WU17 664 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 EDEM1Q92611 657 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 P2RY11Q96G91 374 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 FAXDC2Q96IV6 333 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 UBXN6Q9BZV1 441 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 STON1Q9Y6Q2 735 aa18.79■□□□□ 0.6
CIRBP-243ENST00000593128 IGHV1OR15-9A0A0B4J2B8 117 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 PIK3R2O00459 728 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 CDX4O14627 284 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-243ENST00000593128 PSMA7O14818 248 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 TSPAN3O60637 253 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 KRT37O76014 449 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 LCP1P13796 627 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 PMLP29590 882 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 ZNF33AQ06730 810 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 BST2Q10589 180 aaKnown RBP18.78■□□□□ 0.6
CIRBP-243ENST00000593128 FOXC1Q12948 553 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 STARD3Q14849 445 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 GEN1Q17RS7 908 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 RAB41Q5JT25 222 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 FYB2Q5VWT5 728 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 FMNL3Q8IVF7 1028 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 RGL4Q8IZJ4 473 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 DEFB124Q8NES8 71 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 GABRG3Q99928 467 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 CIPCQ9C0C6 399 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 CD93Q9NPY3 652 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 EVLQ9UI08 416 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-243ENST00000593128 PILRBQ9UKJ0 227 aa18.78■□□□□ 0.6
CIRBP-243ENST00000593128 XPO1O14980 1071 aaKnown RBP18.77■□□□□ 0.6
CIRBP-243ENST00000593128 ZNF217O75362 1048 aa18.77■□□□□ 0.6
CIRBP-243ENST00000593128 MFAP3P55082 362 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms