RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	LSM7	Q9UK45	103 aa	Known RBP	19.26	■□□□□ 0.67
CIRBP-238	ENST00000592412	STON1	Q9Y6Q2	735 aa		19.26	■□□□□ 0.67
CIRBP-238	ENST00000592412	APC2	O95996	2303 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	CBFA2T3	O75081	653 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	STC2	O76061	302 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	PENK	P01210	267 aa	Predicted RBP	19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	FTH1P19	P0C7X4	201 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	ACO1	P21399	889 aa	Known RBP	19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	CD6	P30203	668 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	IL12RB1	P42701	662 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	INCA1	Q0VD86	236 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	SCAP	Q12770	1279 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	ENPP2	Q13822	863 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	GEN1	Q17RS7	908 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	FYB2	Q5VWT5	728 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	SV2A	Q7L0J3	742 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	METTL3	Q86U44	580 aa	Known RBP	19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	GOLGA5	Q8TBA6	731 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	DNASE2B	Q8WZ79	361 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	FOXJ1	Q92949	421 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	TOE1	Q96GM8	510 aa	Known RBP	19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	APOBEC3G	Q9HC16	384 aa	Known RBP	19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	SUSD2	Q9UGT4	822 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	SLC27A6	Q9Y2P4	619 aa		19.25	■□□□□ 0.67
CIRBP-238	ENST00000592412	BPTF	Q12830	3046 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	ZBTB24	O43167	697 aa	Predicted RBP	19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	NDUFS2	O75306	463 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	RPN1	P04843	607 aa	Known RBP	19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	KIF11	P52732	1056 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	MFAP3	P55082	362 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	BNC1	Q01954	994 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	RBBP8NL	Q8NC74	664 aa	Predicted RBP	19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	TAF4B	Q92750	862 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	ZNF396	Q96N95	335 aa	Predicted RBP	19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	BACH2	Q9BYV9	841 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	IL21R	Q9HBE5	538 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	PNPLA8	Q9NP80	782 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	19.24	■□□□□ 0.67	4e-7	■■■■■ 57
CIRBP-238	ENST00000592412	THAP10	Q9P2Z0	257 aa	Predicted RBP	19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	DNMT3L	Q9UJW3	386 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	GPSM3	Q9Y4H4	160 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	PCDHA5	Q9Y5H7	936 aa		19.24	■□□□□ 0.67
CIRBP-238	ENST00000592412	ADAMTS20	P59510	1910 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	HLA-DRA	P01903	254 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	P4HA1	P13674	534 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	RDX	P35241	583 aa	Known RBP	19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	PLA2G4A	P47712	749 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	GOLGA8F	Q08AF8	430 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	GOLGA8DP	Q0D2H9	430 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	ACAP1	Q15027	740 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	WDR45B	Q5MNZ6	344 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	C10orf120	Q5SQS8	335 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	SYCP2L	Q5T4T6	812 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	RESP18	Q5W5W9	173 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	SLCO6A1	Q86UG4	719 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	ZCCHC9	Q8N567	271 aa	Known RBP	19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	TMC2	Q8TDI7	906 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	CYFIP2	Q96F07	1278 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	GPR174	Q9BXC1	333 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	PRDM16	Q9HAZ2	1276 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	ITM2C	Q9NQX7	267 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	CLEC4E	Q9ULY5	219 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	PCDHA7	Q9UN72	937 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	NFE2L3	Q9Y4A8	694 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412	USP3	Q9Y6I4	520 aa		19.23	■□□□□ 0.67
CIRBP-238	ENST00000592412		A0A1B0GTW7	788 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	NCAM1	P13591	858 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	GNS	P15586	552 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	TPMT	P51580	245 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	COPA	P53621	1224 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	CCNI2	Q6ZMN8	369 aa	Predicted RBP	19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	CCDC186	Q7Z3E2	898 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	ZNF276	Q8N554	614 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	PIWIL1	Q96J94	861 aa	Known RBP	19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	NAGPA	Q9UK23	515 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	PCOLCE2	Q9UKZ9	415 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	SLCO1B1	Q9Y6L6	691 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	CKAP5	Q14008	2032 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	ACACA	Q13085	2346 aa		19.22	■□□□□ 0.67
CIRBP-238	ENST00000592412	ACTN4	O43707	911 aa	Known RBP	19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	NR3C1	P04150	777 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	PIK3CA	P42336	1068 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	FOXD4L5	Q5VV16	416 aa	Predicted RBP	19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	TMEM215	Q68D42	235 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	FOXD4L3	Q6VB84	417 aa	Predicted RBP	19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	GLRX5	Q86SX6	157 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	CADM4	Q8NFZ8	388 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	C1orf216	Q8TAB5	229 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	BAHD1	Q8TBE0	780 aa	Predicted RBP	19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	ZDHHC5	Q9C0B5	715 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	TOR4A	Q9NXH8	423 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	SERTAD1	Q9UHV2	236 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	PTPRB	P23467	1997 aa		19.21	■□□□□ 0.67
CIRBP-238	ENST00000592412	MEI4	A8MW99	385 aa		19.2	■□□□□ 0.66
CIRBP-238	ENST00000592412		K7ELQ4	463 aa	Predicted RBP	19.2	■□□□□ 0.66
CIRBP-238	ENST00000592412	PDXK	O00764	312 aa		19.2	■□□□□ 0.66
CIRBP-238	ENST00000592412	IKBKB	O14920	756 aa		19.2	■□□□□ 0.66
CIRBP-238	ENST00000592412	CILP	O75339	1184 aa		19.2	■□□□□ 0.66

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