RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 UBXN6Q9BZV1 441 aa19.26■□□□□ 0.67
CIRBP-237ENST00000592234 FAM124BQ9H5Z6 455 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-237ENST00000592234 CALCOCO1Q9P1Z2 691 aa19.26■□□□□ 0.67
CIRBP-237ENST00000592234 EVLQ9UI08 416 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-237ENST00000592234 ASCC3Q8N3C0 2202 aaKnown RBP19.26■□□□□ 0.67
CIRBP-237ENST00000592234 EPG5Q9HCE0 2579 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 MAP1BP46821 2468 aaKnown RBP19.25■□□□□ 0.67
CIRBP-237ENST00000592234 A0A1W2PQF6 199 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 SLC16A3O15427 465 aaKnown RBP19.25■□□□□ 0.67
CIRBP-237ENST00000592234 AP5Z1O43299 807 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 HMBSP08397 361 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 CISD3P0C7P0 127 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 CHKAP35790 457 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 DPP6P42658 865 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 FKBP3Q00688 224 aaKnown RBP19.25■□□□□ 0.67
CIRBP-237ENST00000592234 RPL6Q02878 288 aaKnown RBP19.25■□□□□ 0.67
CIRBP-237ENST00000592234 LMAN2Q12907 356 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 CBWD6Q4V339 395 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 CBWD3Q5JTY5 395 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 CBWD5Q5RIA9 395 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 SLC36A4Q6YBV0 504 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 ANKRD52Q8NB46 1076 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 IPO4Q8TEX9 1081 aaKnown RBP19.25■□□□□ 0.67
CIRBP-237ENST00000592234 ERLEC1Q96DZ1 483 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 GSDMAQ96QA5 445 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 DCLK3Q9C098 648 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 TMEM74BQ9NUR3 256 aa19.25■□□□□ 0.67
CIRBP-237ENST00000592234 ATXN2Q99700 1313 aaKnown RBP19.25■□□□□ 0.67
CIRBP-237ENST00000592234 TRIM49BA6NDI0 452 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 CDX4O14627 284 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-237ENST00000592234 KLKB1P03952 638 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 CORO1AP31146 461 aaKnown RBP19.24■□□□□ 0.67
CIRBP-237ENST00000592234 TKTL1P51854 596 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 YWHAGP61981 247 aaKnown RBP eCLIP19.24■□□□□ 0.67
CIRBP-237ENST00000592234 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 UAP1L1Q3KQV9 507 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 COBLL1Q53SF7 1204 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 RAB41Q5JT25 222 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 ANKRD40Q6AI12 368 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 RSRC2Q7L4I2 434 aaKnown RBP19.24■□□□□ 0.67
CIRBP-237ENST00000592234 GABRG3Q99928 467 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 MARCH2Q9P0N8 246 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
CIRBP-237ENST00000592234 STRIP2Q9ULQ0 834 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 RAD54BQ9Y620 910 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 CHD8Q9HCK8 2581 aa19.24■□□□□ 0.67
CIRBP-237ENST00000592234 ZNF217O75362 1048 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 NDUFV2P19404 249 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 ITPKAP23677 461 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
CIRBP-237ENST00000592234 YWHAEP62258 255 aaKnown RBP19.23■□□□□ 0.67
CIRBP-237ENST00000592234 CUL2Q13617 745 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 SGO2Q562F6 1265 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 SH3PXD2AQ5TCZ1 1133 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 KIAA1211LQ6NV74 962 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 ZC3H3Q8IXZ2 948 aaKnown RBP19.23■□□□□ 0.67
CIRBP-237ENST00000592234 DEFB119Q8N690 84 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 CACNA2D2Q9NY47 1150 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 HESX1Q9UBX0 185 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 FBXO10Q9UK96 956 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 PILRBQ9UKJ0 227 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 MAN1B1Q9UKM7 699 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 TSPAN16Q9UKR8 245 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 CYP8B1Q9UNU6 501 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 COQ4Q9Y3A0 265 aa19.23■□□□□ 0.67
CIRBP-237ENST00000592234 IGHV1OR15-9A0A0B4J2B8 117 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 SLC12A8A0AV02 714 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 GFRA2O00451 464 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 GIPC1O14908 333 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 ZBED1O96006 694 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 PENKP01210 267 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-237ENST00000592234 BCAT1P54687 386 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 LRRC63Q05C16 580 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 ST3GAL2Q16842 350 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 FYB2Q5VWT5 728 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 SLC23A3Q6PIS1 610 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 DENND1CQ8IV53 801 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 SPATA20Q8TB22 786 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 P2RY11Q96G91 374 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 ULBP1Q9BZM6 244 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 LRRC4Q9HBW1 653 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 CD248Q9HCU0 757 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 ARMCX3Q9UH62 379 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-237ENST00000592234 AGO1Q9UL18 857 aaKnown RBP19.22■□□□□ 0.67
CIRBP-237ENST00000592234 SLC27A6Q9Y2P4 619 aa19.22■□□□□ 0.67
CIRBP-237ENST00000592234 WASH3PC4AMC7 463 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 TULP2O00295 520 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 BIN1O00499 593 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 XPO1O14980 1071 aaKnown RBP19.21■□□□□ 0.67
CIRBP-237ENST00000592234 CYBBP04839 570 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 CFIP05156 583 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 CD19P15391 556 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 ENGP17813 658 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 HOXD12P35452 270 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 ANP32AP39687 249 aaKnown RBP19.21■□□□□ 0.67
CIRBP-237ENST00000592234 MAPK8P45983 427 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 MFAP3P55082 362 aa19.21■□□□□ 0.67
CIRBP-237ENST00000592234 SHC2P98077 582 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms