RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 TLR10Q9BXR5 811 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 ADAM33Q9BZ11 813 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CCSER2Q9H7U1 834 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 PIDD1Q9HB75 910 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 HCFC1R1Q9NWW0 138 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 MARCH2Q9P0N8 246 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 ZMYM5Q9UJ78 669 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 DNMT3LQ9UJW3 386 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 HYOU1Q9Y4L1 999 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 PCDHA3Q9Y5H8 950 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CLUHO75153 1309 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 IRAK2O43187 625 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 COCHO43405 550 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 PRPSAP2O60256 369 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 KRT7P08729 469 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 IGFBP4P22692 258 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 DDX6P26196 483 aaKnown RBP eCLIP15.79■□□□□ 0.12
DDX39A-211ENST00000590239 CASQ1P31415 396 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
DDX39A-211ENST00000590239 TAS2R40P59535 323 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 EFEMP1Q12805 493 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 NME3Q13232 169 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 SYCE2Q6PIF2 218 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 TMC5Q6UXY8 1006 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 GRASPQ7Z6J2 395 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-211ENST00000590239 GPR149Q86SP6 731 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 UBL4BQ8N7F7 174 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 SHKBP1Q8TBC3 707 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 ADAM32Q8TC27 787 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 ATXN3LQ9H3M9 355 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 PIGVQ9NUD9 493 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.79■□□□□ 0.129e-7■■■■□ 24.3
DDX39A-211ENST00000590239 CALCOCO1Q9P1Z2 691 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 USP18Q9UMW8 372 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 TLR6Q9Y2C9 796 aa15.79■□□□□ 0.12
DDX39A-211ENST00000590239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.79■□□□□ 0.12
DDX39A-211ENST00000590239 HBS1LQ9Y450 684 aaKnown RBP15.79■□□□□ 0.12
DDX39A-211ENST00000590239 SPTBN5Q9NRC6 3674 aaKnown RBP15.79■□□□□ 0.12
DDX39A-211ENST00000590239 A0A1W2PRU2 124 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 OLFM2O95897 454 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 TBX18O95935 607 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 SLC2A3P11169 496 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 AIF1P55008 147 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 SLC25A11Q02978 314 aaKnown RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 PPP2R5DQ14738 602 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 TRIP4Q15650 581 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 ARHGAP15Q53QZ3 475 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 RAB6CQ53S08 254 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 BOLA3Q53S33 107 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 PRSS36Q5K4E3 855 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 BRMS1LQ5PSV4 323 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 RARS2Q5T160 578 aaKnown RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 DAB2IPQ5VWQ8 1189 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 PSTKQ8IV42 348 aaKnown RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 TEKT4Q8WW24 435 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 FAM161BQ96MY7 647 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 NACA2Q9H009 215 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 RAB6CQ9H0N0 254 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 WDR6Q9NNW5 1121 aaKnown RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 DDX56Q9NY93 547 aaKnown RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 SFMBT1Q9UHJ3 866 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 NUDT5Q9UKK9 219 aa15.78■□□□□ 0.12
DDX39A-211ENST00000590239 PRRC2BQ5JSZ5 2229 aaKnown RBP15.78■□□□□ 0.12
DDX39A-211ENST00000590239 TRAV19A0A0A6YYK7 116 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 C2orf78A6NCI8 922 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 ENC1O14682 589 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 DDX3YO15523 660 aaKnown RBP15.77■□□□□ 0.12
DDX39A-211ENST00000590239 MOSPD3O75425 235 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 IGLV3-27P01718 113 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.12
DDX39A-211ENST00000590239 TCF4P15884 667 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PRLRP16471 622 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 CCR2P41597 374 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PEX5P50542 639 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 NTHL1P78549 312 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 ITIH3Q06033 890 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 RING1Q06587 406 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 MTA1Q13330 715 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PAPD7Q5XG87 772 aaKnown RBP15.77■□□□□ 0.12
DDX39A-211ENST00000590239 TXNDC8Q6A555 127 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 SCYL2Q6P3W7 929 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 CYP4V2Q6ZWL3 525 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-211ENST00000590239 FAM131BQ86XD5 332 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 KATNAL2Q8IYT4 538 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 KIF18AQ8NI77 898 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 KRT35Q92764 455 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 NTAN1Q96AB6 310 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PABPC5Q96DU9 382 aaKnown RBP15.77■□□□□ 0.12
DDX39A-211ENST00000590239 SLC39A13Q96H72 371 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PEBP4Q96S96 227 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 ADAM7Q9H2U9 754 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 TASP1Q9H6P5 420 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 TRPC7Q9HCX4 862 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.77■□□□□ 0.127e-6■□□□□ 10.1
DDX39A-211ENST00000590239 CLEC1BQ9P126 229 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PCSK1NQ9UHG2 260 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 RASAL2Q9UJF2 1139 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 SNX12Q9UMY4 172 aa15.77■□□□□ 0.12
DDX39A-211ENST00000590239 PACSIN2Q9UNF0 486 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-211ENST00000590239 MRPS23Q9Y3D9 190 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms