RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ARHGAP1Q07960 439 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 C1orf146Q5VVC0 180 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 XYLT1Q86Y38 959 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 ALLCQ8N6M5 410 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 HTR3CQ8WXA8 447 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 FZD8Q9H461 694 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.06■□□□□ 0
RETREG3-208ENST00000589797 IPPQ9Y573 584 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 SMCHD1A6NHR9 2005 aa15.06■□□□□ 0
RETREG3-208ENST00000589797 SLX4Q8IY92 1834 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 SDR42E2A6NKP2 422 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 SPECC1L-ADORA2AF8WAN1 911 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 FAM155BO75949 473 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 DARSP14868 501 aaKnown RBP15.05■□□□□ 0
RETREG3-208ENST00000589797 ART3Q13508 389 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 CTXN3Q4LDR2 81 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 ANKRD20A8PQ5CZ79 823 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 STKLD1Q8NE28 680 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 MTG1Q9BT17 334 aaPredicted RBP15.05■□□□□ 0
RETREG3-208ENST00000589797 THTPAQ9BU02 230 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 HAPLN2Q9GZV7 340 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 LRRC4CQ9HCJ2 640 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 GRHL1Q9NZI5 618 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 ARMCX1Q9P291 453 aa15.05■□□□□ 0
RETREG3-208ENST00000589797 CYP1A1P04798 512 aaPredicted RBP15.05■□□□□ -0
RETREG3-208ENST00000589797 ERVK-10P10266 1014 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 IL1R2P27930 398 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 TTC39BQ5VTQ0 682 aaPredicted RBP15.05■□□□□ -0
RETREG3-208ENST00000589797 FAM171A1Q5VUB5 890 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 NLRP9Q7RTR0 991 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 LONP2Q86WA8 852 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 KCNK16Q96T55 309 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 STARD7Q9NQZ5 370 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 ACSS2Q9NR19 701 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 IARS2Q9NSE4 1012 aaKnown RBP15.05■□□□□ -0
RETREG3-208ENST00000589797 B2RBV5 119 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 PTGIRP43119 386 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 DRG2P55039 364 aaKnown RBP15.05■□□□□ -0
RETREG3-208ENST00000589797 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 BLOC1S5Q8TDH9 187 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 USP54Q70EL1 1684 aa15.05■□□□□ -0
RETREG3-208ENST00000589797 CBX6O95503 412 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 SLC39A12Q504Y0 691 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 TAF2Q6P1X5 1199 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 SLC26A11Q86WA9 606 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 CYP4F12Q9HCS2 524 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 C2CD2Q9Y426 696 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 SETSIPP0DME0 302 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 MYL2P10916 166 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 TCN1P20061 433 aaPredicted RBP15.04■□□□□ -0
RETREG3-208ENST00000589797 TNFRSF8P28908 595 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 GAD2Q05329 585 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 ZNF618Q5T7W0 954 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 C9orf57Q5W0N0 161 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 BBS12Q6ZW61 710 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 KIRREL3Q8IZU9 778 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 CDC26Q8NHZ8 85 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 NPLOC4Q8TAT6 608 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 ELMO2Q96JJ3 720 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 VANGL2Q9ULK5 521 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 PSMB4P28070 264 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 CDKN2BP42772 138 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 SREBF2Q12772 1141 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 CCDC142Q17RM4 750 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 SPRYD7Q5W111 196 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 GIPC2Q8TF65 315 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 N4BP2L2Q92802 583 aaPredicted RBP15.04■□□□□ -0
RETREG3-208ENST00000589797 FBXO32Q969P5 355 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 RBM22Q9NW64 420 aaKnown RBP eCLIP15.04■□□□□ -04e-8■■■■□ 23.7
RETREG3-208ENST00000589797 SLC27A5Q9Y2P5 690 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 SNX10Q9Y5X0 201 aa15.04■□□□□ -0
RETREG3-208ENST00000589797 MANSC4A6NHS7 340 aaPredicted RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 PRRG1O14668 218 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 OPHN1O60890 802 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 PAMP19021 973 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 PGM1P36871 562 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 TWF1Q12792 350 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 GRAMD1BQ3KR37 738 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 ZDHHC24Q6UX98 284 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 STRA8Q7Z7C7 330 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 ANKRD52Q8NB46 1076 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 NRDE2Q9H7Z3 1164 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 OR12D3Q9UGF7 316 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 AFF4Q9UHB7 1163 aaKnown RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 SLC12A8A0AV02 714 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 LTFP02788 710 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 NPR3P17342 541 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 ASPAP45381 313 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 CSE1LP55060 971 aaKnown RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 CA9Q16790 459 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 FAM110CQ1W6H9 321 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 OR52K1Q8NGK4 314 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 GRAMD1AQ96CP6 724 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 XAB2Q9HCS7 855 aaKnown RBP15.03■□□□□ -0
RETREG3-208ENST00000589797 NT5MQ9NPB1 228 aa15.03■□□□□ -0
RETREG3-208ENST00000589797 SFMBT1Q9UHJ3 866 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms