RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 MPGP29372 298 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 JAK3P52333 1124 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 SEMA3BQ13214 749 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 DNASE1L3Q13609 305 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 KCNJ12Q14500 433 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 STARD3Q14849 445 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 RAB30Q15771 203 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 PFKFB3Q16875 520 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 TMEM196Q5HYL7 178 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 CEP78Q5JTW2 689 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 ZKSCAN2Q63HK3 967 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 GRHL2Q6ISB3 625 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 ZNF813Q6ZN06 617 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 ZNF66Q6ZN08 573 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 NEK8Q86SG6 692 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 SKAP1Q86WV1 359 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 CNGA4Q8IV77 575 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 GALNT16Q8N428 558 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 MUL1Q969V5 352 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 GDF15Q99988 308 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 EFHD1Q9BUP0 239 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 STK33Q9BYT3 514 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 VPS45Q9NRW7 570 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 FZD4Q9ULV1 537 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 MAGED2Q9UNF1 606 aaPredicted RBP4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 LRCH1Q9Y2L9 728 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
HMGN1P30-201ENST00000589286 OR2W5A6NFC9 320 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 CGB1A6NKQ9 187 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 ADAMTS3O15072 1205 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 PRAMEF2O60811 474 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 PRR35P0CG20 571 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 MATN1P21941 496 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 GALNSP34059 522 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 WDR5P61964 334 aaKnown RBP4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 FHL3Q13643 280 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 CBFBQ13951 182 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 UBE4AQ14139 1066 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 CSHL1Q14406 222 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 CNGA3Q16281 694 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 MTX3Q5HYI7 312 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 TMTC4Q5T4D3 741 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 ANO7Q6IWH7 933 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 SLC18B1Q6NT16 456 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 CCDC144NLQ6NUI1 221 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 KRT27Q7Z3Y8 459 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 YTHDF3Q7Z739 585 aaKnown RBP4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 MORC1Q86VD1 984 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 CLASRPQ8N2M8 674 aaKnown RBP4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 OSR1Q8TAX0 266 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 TMEM41AQ96HV5 264 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 SH2D3AQ9BRG2 576 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 RNF26Q9BY78 433 aaPredicted RBP4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 RXFP3Q9NSD7 469 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 FBXO28Q9NVF7 368 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 ARL8BQ9NVJ2 186 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 FNIP2Q9P278 1114 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 PI4KBQ9UBF8 816 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 VPS4AQ9UN37 437 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 PCDHB2Q9Y5E7 798 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 SPATA31A1Q5TZJ5 1347 aa4.12□□□□□ -1.75
HMGN1P30-201ENST00000589286 PNMA6EA0A0J9YXQ4 647 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 SMIM35A0A1B0GVV1 85 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 J3KTA2 159 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 CBFA2T3O75081 653 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 USP12O75317 370 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 SETSIPP0DME0 302 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 DUSP1P28562 367 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 TACR3P29371 465 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 PPM1AP35813 382 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 IGHMBP2P38935 993 aaKnown RBP4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 RAE1P78406 368 aaKnown RBP4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 GHRHRQ02643 423 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 FAM110CQ1W6H9 321 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 AWAT1Q58HT5 328 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 FAM90A2PQ658T7 463 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 XRRA1Q6P2D8 792 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 PGBD2Q6P3X8 592 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 GATAD2AQ86YP4 633 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 WDR60Q8WVS4 1066 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 CUL5Q93034 780 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 PRR11Q96HE9 360 aaPredicted RBP4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 SLC29A3Q9BZD2 475 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 NUAK2Q9H093 628 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 SAP30LQ9HAJ7 183 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 PDGFCQ9NRA1 345 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 CHST12Q9NRB3 414 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 DTNAQ9Y4J8 743 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 ZNF804BA4D1E1 1349 aa4.11□□□□□ -1.75
HMGN1P30-201ENST00000589286 FFAR2O15552 330 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 NTSR2O95665 410 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 ATF7P17544 494 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 ARHGAP25P42331 645 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 HTR3AP46098 478 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 ALDH18A1P54886 795 aaKnown RBP4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 SLC14A1Q13336 389 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 OS9Q13438 667 aaPredicted RBP4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 MORN5Q5VZ52 161 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 TOGARAM2Q6ZUX3 1019 aa4.1□□□□□ -1.75
HMGN1P30-201ENST00000589286 NRSN1Q8IZ57 195 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms