RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 KIF19Q2TAC6 998 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 LAYNQ6UX15 382 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 DBX2Q6ZNG2 339 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 LINC00301Q8NCQ3 95 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 B3GALNT2Q8NCR0 500 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 PRCCQ92733 491 aaPredicted RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 SIPA1Q96FS4 1042 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 KCNK16Q96T55 309 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 MED10Q9BTT4 135 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 STRA6Q9BX79 667 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 B3GNT5Q9BYG0 378 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 PLK2Q9NYY3 685 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 MARK1Q9P0L2 795 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 FTSJ1Q9UET6 329 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 LSM7Q9UK45 103 aaKnown RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 SNX11Q9Y5W9 270 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 SLCO1B1Q9Y6L6 691 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 COL12A1Q99715 3063 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 PIEZO2Q9H5I5 2752 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 ATP8B3O60423 1300 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 PTPN13Q12923 2485 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 A8MXQ7 604 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 KCNK3O14649 394 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 TLX3O43711 291 aaPredicted RBP9.03□□□□□ -0.96
SDF2-204ENST00000587338 SYNCRIPO60506 623 aaKnown RBP9.03□□□□□ -0.96
SDF2-204ENST00000587338 TLR5O60602 858 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 TBX18O95935 607 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 CISD3P0C7P0 127 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 HNF1BP35680 557 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 IL12RB1P42701 662 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 GRIN1Q05586 938 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 GOLGA8FQ08AF8 430 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 GOLGA8DPQ0D2H9 430 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 SLC39A14Q15043 492 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 TEAD4Q15561 434 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 INAVAQ3KP66 663 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 HTR3DQ70Z44 454 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 FAM35AQ86V20 835 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 TMPRSS12Q86WS5 348 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 TMPRSS6Q8IU80 811 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 GPD1LQ8N335 351 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 LSM14AQ8ND56 463 aaKnown RBP9.03□□□□□ -0.96
SDF2-204ENST00000587338 C1orf216Q8TAB5 229 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 NUP58Q9BVL2 599 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 GZF1Q9H116 711 aaPredicted RBP9.03□□□□□ -0.96
SDF2-204ENST00000587338 DMAP1Q9NPF5 467 aaPredicted RBP9.03□□□□□ -0.96
SDF2-204ENST00000587338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.03□□□□□ -0.96
SDF2-204ENST00000587338 SEL1LQ9UBV2 794 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 PCDHA7Q9UN72 937 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 AK5Q9Y6K8 562 aa9.03□□□□□ -0.96
SDF2-204ENST00000587338 MUC22E2RYF6 1773 aaPredicted RBP9.03□□□□□ -0.96
SDF2-204ENST00000587338 NUMA1Q14980 2115 aa9.02□□□□□ -0.96
SDF2-204ENST00000587338 COL6A6A6NMZ7 2263 aa9.02□□□□□ -0.96
SDF2-204ENST00000587338 ZNF233A6NK53 670 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 H0Y8X5 98 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 GREM1O60565 184 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 PPP6R2O75170 966 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 TACC1O75410 805 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 CLSTN1O94985 981 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 BMP15O95972 392 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 ZDHHC11BP0C7U3 371 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 IDEP14735 1019 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 JUPP14923 745 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 GAP43P17677 238 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 LONP1P36776 959 aaKnown RBP9.02□□□□□ -0.97
SDF2-204ENST00000587338 PGFP49763 221 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 CDH8P55286 799 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 CFHR1Q03591 330 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 WDR72Q3MJ13 1102 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 SNX30Q5VWJ9 437 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 CAVIN1Q6NZI2 390 aaKnown RBP9.02□□□□□ -0.97
SDF2-204ENST00000587338 CCDC73Q6ZRK6 1079 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 TRAPPC11Q7Z392 1133 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 GPR155Q7Z3F1 870 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 ADAT2Q7Z6V5 191 aaKnown RBP9.02□□□□□ -0.97
SDF2-204ENST00000587338 CBWD2Q8IUF1 395 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 WDR49Q8IV35 697 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 BAP1Q92560 729 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 IGSF8Q969P0 613 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 CLIC6Q96NY7 704 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 KLF16Q9BXK1 252 aaPredicted RBP9.02□□□□□ -0.97
SDF2-204ENST00000587338 FGFBP2Q9BYJ0 223 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 C6orf106Q9H6K1 298 aaPredicted RBP9.02□□□□□ -0.97
SDF2-204ENST00000587338 TM9SF3Q9HD45 589 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 THAP10Q9P2Z0 257 aaPredicted RBP9.02□□□□□ -0.97
SDF2-204ENST00000587338 ANKRD6Q9Y2G4 727 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
SDF2-204ENST00000587338 TEX51A0A1B0GUA7 166 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 CBX4O00257 560 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 NPC1O15118 1278 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 PCDHGA12O60330 932 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 CUTAO60888 179 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 AP1G2O75843 785 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 CST3P01034 146 aaPredicted RBP9.01□□□□□ -0.97
SDF2-204ENST00000587338 IGLV3-19P01714 112 aa9.01□□□□□ -0.97
SDF2-204ENST00000587338 EPHX1P07099 455 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms