RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KAT7O95251 611 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 KLKB1P03952 638 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 NCAM1P13591 858 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 ATP1A3P13637 1013 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 CYP11B1P15538 503 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 RPL34P49207 117 aaKnown RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 HARS2P49590 506 aaKnown RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 ZNF165P49910 485 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 POLR2FP61218 127 aaKnown RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 UBXN1Q04323 297 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 SYCP1Q15431 976 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 TAF3Q5VWG9 929 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 MSANTD2Q6P1R3 559 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 SCUBE3Q8IX30 993 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 ATRIPQ8WXE1 791 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 BHMTQ93088 406 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 XPO6Q96QU8 1125 aaKnown RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 SPAG5Q96R06 1193 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 FAM126AQ9BYI3 521 aaPredicted RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 STK33Q9BYT3 514 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 SYNCQ9H7C4 482 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 DNAJC17Q9NVM6 304 aaKnown RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 ZSCAN32Q9NX65 697 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 MARK1Q9P0L2 795 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 WDR35Q9P2L0 1181 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 DEC1Q9P2X7 70 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 AGO1Q9UL18 857 aaKnown RBP15.48■□□□□ 0.07
ATG4D-207ENST00000587256 PCDHGA2Q9Y5H1 932 aa15.48■□□□□ 0.07
ATG4D-207ENST00000587256 KIAA1549LQ6ZVL6 1849 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 PROB1E7EW31 1015 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 CAPN9O14815 690 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 PAPSS1O43252 624 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-207ENST00000587256 TULP3O75386 442 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 PAPSS2O95340 614 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-207ENST00000587256 TYRP14679 529 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 CHKAP35790 457 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 GRIA2P42262 883 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 NRLP54845 237 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 SNX16P57768 344 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 PREPLQ4J6C6 727 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-207ENST00000587256 GRAMD4Q6IC98 578 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 TMEM110Q86TL2 294 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
ATG4D-207ENST00000587256 ETFBKMTQ8IXQ9 262 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 NEK11Q8NG66 645 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 PPP1R13BQ96KQ4 1090 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 CPXM1Q96SM3 734 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 LHX5Q9H2C1 402 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 HSD3B7Q9H2F3 369 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 C2orf42Q9NWW7 574 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 SLC8A2Q9UPR5 921 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 SIK3Q9Y2K2 1263 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 DAAM1Q9Y4D1 1078 aa15.47■□□□□ 0.07
ATG4D-207ENST00000587256 CHURC1-FNTBB4DL54 471 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 EPHB6O15197 1021 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 CACNG3O60359 315 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 GFRA3O60609 400 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 GFPT2O94808 682 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 CYBBP04839 570 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 TDGF1P13385 188 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 MESP2Q0VG99 397 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 TRIP4Q15650 581 aaPredicted RBP15.46■□□□□ 0.07
ATG4D-207ENST00000587256 C2orf27AQ580R0 203 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 C10orf76Q5T2E6 689 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 HEATR6Q6AI08 1181 aaKnown RBP15.46■□□□□ 0.07
ATG4D-207ENST00000587256 NUDT18Q6ZVK8 323 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 TERB1Q8NA31 727 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 TMEM35BQ8NCS4 154 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 DQX1Q8TE96 717 aaKnown RBP15.46■□□□□ 0.07
ATG4D-207ENST00000587256 SERPINB11Q96P15 392 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 FUCA2Q9BTY2 467 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 PLK2Q9NYY3 685 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 TJP2Q9UDY2 1190 aa15.46■□□□□ 0.07
ATG4D-207ENST00000587256 TBC1D3BA6NDS4 549 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 PRR23AA6NEV1 266 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 K7EQS6 105 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 K7ESF4 209 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
ATG4D-207ENST00000587256 TBX4P57082 545 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 YWHAZP63104 245 aaKnown RBP15.45■□□□□ 0.06
ATG4D-207ENST00000587256 TPM4P67936 248 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 PTPN20Q4JDL3 420 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 NUGGCQ68CJ6 796 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 OR6B2Q6IFH4 312 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 TOGARAM2Q6ZUX3 1019 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 FAM183BPQ6ZVS7 135 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 APTXQ7Z2E3 356 aaKnown RBP15.45■□□□□ 0.06
ATG4D-207ENST00000587256 NOP9Q86U38 636 aaKnown RBP15.45■□□□□ 0.06
ATG4D-207ENST00000587256 SFTPA1Q8IWL2 248 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 PHTF2Q8N3S3 785 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 WDTC1Q8N5D0 677 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 ZBTB44Q8NCP5 570 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 ADAM32Q8TC27 787 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 EPS8L1Q8TE68 723 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 USP33Q8TEY7 942 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 NELL1Q92832 810 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 PIWIL1Q96J94 861 aaKnown RBP15.45■□□□□ 0.06
ATG4D-207ENST00000587256 SEMA4AQ9H3S1 761 aa15.45■□□□□ 0.06
ATG4D-207ENST00000587256 POPDC2Q9HBU9 364 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms