RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 MAP4K4O95819 1239 aaPredicted RBP4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 MYL3P08590 195 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 EN2P19622 333 aaPredicted RBP4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 MCM5P33992 734 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 IL6STP40189 918 aaPredicted RBP4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 PGGT1BP53609 377 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 SLC13A2Q13183 592 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 SEMA5AQ13591 1074 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 PRTGQ2VWP7 1150 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 COBLL1Q53SF7 1204 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 NR4A3Q92570 626 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 MAML1Q92585 1016 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 SARGQ9BW04 601 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 XPNPEP3Q9NQH7 507 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 SACM1LQ9NTJ5 587 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 TMEM45AQ9NWC5 275 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 ZSCAN32Q9NX65 697 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 CPNE7Q9UBL6 633 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 CDY1Q9Y6F8 540 aa4.65□□□□□ -1.67
RPRD1A-203ENST00000585879 TMEM233B4DJY2 109 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 BTN3A1O00481 513 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 PMM2O15305 246 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 FRS3O43559 492 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 CAND2O75155 1236 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 GAS8-AS1O95177 125 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 HRGP04196 525 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 ARRB2P32121 409 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 FAM110CQ1W6H9 321 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 C9orf50Q5SZB4 431 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 SCNM1Q9BWG6 230 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 MLXIPLQ9NP71 852 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 DDX21Q9NR30 783 aaKnown RBP eCLIP4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 GJB4Q9NTQ9 266 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 GEMIN8Q9NWZ8 242 aaKnown RBP4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 DNMT3BQ9UBC3 853 aaKnown RBP4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 AFF4Q9UHB7 1163 aaKnown RBP4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 ASAP1Q9ULH1 1129 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 SNX13Q9Y5W8 968 aa4.64□□□□□ -1.67
RPRD1A-203ENST00000585879 RRHO14718 337 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 FYB1O15117 783 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 SPTLC2O15270 562 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 SRGAP2O75044 1071 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 NDUFB8O95169 186 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 PLAUP00749 431 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 MYL1P05976 194 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 CD63P08962 238 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 NBPF7P0C2Y1 421 aaPredicted RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 TRIM27P14373 513 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 HOXB2P14652 356 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 ALDH7A1P49419 539 aaKnown RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 SUMO3P55854 103 aaPredicted RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 RPS16P62249 146 aaKnown RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 DEUP1Q05D60 604 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 RAB32Q13637 225 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 SAFBQ15424 915 aaKnown RBP eCLIP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 PFKFB3Q16875 520 aaPredicted RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 C3orf38Q5JPI3 329 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 CAPRIN2Q6IMN6 1127 aaKnown RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 CCSAPQ6IQ19 270 aaPredicted RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 RFX8Q6ZV50 586 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 BCAS4Q8TDM0 211 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 DNASE2BQ8WZ79 361 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 TRMT61AQ96FX7 289 aaKnown RBP4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 ARHGAP39Q9C0H5 1083 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 SMURF2Q9HAU4 748 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 ZNF287Q9HBT7 754 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 SEMA5BQ9P283 1151 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 FZD4Q9ULV1 537 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 PCDHA12Q9UN75 941 aa4.63□□□□□ -1.67
RPRD1A-203ENST00000585879 KPNA5O15131 536 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 CD3EAPO15446 510 aaKnown RBP4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 TBC1D4O60343 1298 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 SYF2O95926 243 aaKnown RBP4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 MYF5P13349 255 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 ZKSCAN1P17029 563 aaPredicted RBP4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 CDC25AP30304 524 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 MTHFSP49914 203 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 GPC5P78333 572 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 CNGA2Q16280 664 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 FAM57BQ71RH2 274 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 SESTD1Q86VW0 696 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 PNPLA1Q8N8W4 532 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 APIPQ96GX9 242 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 LMLNQ96KR4 655 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 ARNT2Q9HBZ2 717 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 DECR2Q9NUI1 292 aa4.62□□□□□ -1.67
RPRD1A-203ENST00000585879 TRIM43BA6NCK2 446 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 RHPN2P1A8MT19 583 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 A8MVJ9 347 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 EXOC5O00471 708 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 PLIN1O60240 522 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 SLC5A1P13866 664 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 NEK3P51956 506 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 HLTFQ14527 1009 aaKnown RBP eCLIP4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 KPNB1Q14974 876 aaKnown RBP4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 LONRF1Q17RB8 773 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 GFI1BQ5VTD9 330 aa4.61□□□□□ -1.67
RPRD1A-203ENST00000585879 IL31Q6EBC2 164 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms