RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CCDC138Q96M89 665 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 FAM118BQ9BPY3 351 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 CINPQ9BW66 212 aaPredicted RBP4.23□□□□□ -1.73
VAPA-206ENST00000583475 EIF2AQ9BY44 585 aaKnown RBP4.23□□□□□ -1.73
VAPA-206ENST00000583475 RXFP3Q9NSD7 469 aa4.23□□□□□ -1.73
VAPA-206ENST00000583475 TTC3P53804 2025 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 SPATA31A1Q5TZJ5 1347 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 C16orf96A6NNT2 1141 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 DSCR3O14972 297 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 ZSCAN9O15535 394 aaPredicted RBP4.22□□□□□ -1.73
VAPA-206ENST00000583475 NBPF7P0C2Y1 421 aaPredicted RBP4.22□□□□□ -1.73
VAPA-206ENST00000583475 PECAM1P16284 738 aaPredicted RBP4.22□□□□□ -1.73
VAPA-206ENST00000583475 NEK3P51956 506 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 DGKQP52824 942 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 ZNF268Q14587 947 aaPredicted RBP4.22□□□□□ -1.73
VAPA-206ENST00000583475 ETFDHQ16134 617 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 SLC5A9Q2M3M2 681 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 ARHGAP15Q53QZ3 475 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 IZUMO3Q5VZ72 239 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 PAPD7Q5XG87 772 aaKnown RBP4.22□□□□□ -1.73
VAPA-206ENST00000583475 TLDC1Q6P9B6 456 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 CNGA4Q8IV77 575 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 SMG7Q92540 1137 aaKnown RBP4.22□□□□□ -1.73
VAPA-206ENST00000583475 HIC2Q96JB3 615 aa4.22□□□□□ -1.73
VAPA-206ENST00000583475 FAM234BA2RU67 622 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 E5RJQ4 531 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 DHHO43323 396 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 TOP3BO95985 862 aaKnown RBP4.21□□□□□ -1.74
VAPA-206ENST00000583475 IDEP14735 1019 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 EEF1GP26641 437 aaKnown RBP4.21□□□□□ -1.74
VAPA-206ENST00000583475 HNRNPA0Q13151 305 aaKnown RBP4.21□□□□□ -1.74
VAPA-206ENST00000583475 PICALMQ13492 652 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 TRIP6Q15654 476 aaKnown RBP4.21□□□□□ -1.74
VAPA-206ENST00000583475 MAPKAPK3Q16644 382 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 MAP9Q49MG5 647 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 TMEM196Q5HYL7 178 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 OSR1Q8TAX0 266 aaPredicted RBP4.21□□□□□ -1.74
VAPA-206ENST00000583475 SCARB1Q8WTV0 552 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 ZNF566Q969W8 418 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 MYD88Q99836 296 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 ADGRE3Q9BY15 652 aa4.21□□□□□ -1.74
VAPA-206ENST00000583475 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.21□□□□□ -1.74
VAPA-206ENST00000583475 SPRTNQ9H040 489 aaPredicted RBP4.21□□□□□ -1.74
VAPA-206ENST00000583475 MOSPD3O75425 235 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 DRD1P21728 446 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 HSPA7P48741 367 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 JAK3P52333 1124 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 WDR5P61964 334 aaKnown RBP4.2□□□□□ -1.74
VAPA-206ENST00000583475 RAE1P78406 368 aaKnown RBP4.2□□□□□ -1.74
VAPA-206ENST00000583475 GHRHRQ02643 423 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 SEMA3BQ13214 749 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 PFKFB3Q16875 520 aaPredicted RBP4.2□□□□□ -1.74
VAPA-206ENST00000583475 MPEG1Q2M385 716 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 Q4G0T1 1027 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 CC2D1BQ5T0F9 858 aaKnown RBP4.2□□□□□ -1.74
VAPA-206ENST00000583475 CCDC181Q5TID7 509 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 LRCH2Q5VUJ6 765 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 PIK3AP1Q6ZUJ8 805 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 CLASRPQ8N2M8 674 aaKnown RBP4.2□□□□□ -1.74
VAPA-206ENST00000583475 DENND1AQ8TEH3 1009 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 IGFBPL1Q8WX77 278 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 OVCA2Q8WZ82 227 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 KIAA1191Q96A73 305 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 GRAMD1AQ96CP6 724 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 SGCZQ96LD1 299 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 SIGLEC11Q96RL6 698 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 NUDT22Q9BRQ3 303 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 AGO4Q9HCK5 861 aaKnown RBP4.2□□□□□ -1.74
VAPA-206ENST00000583475 MLXIPLQ9NP71 852 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 CHST12Q9NRB3 414 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 ABHD10Q9NUJ1 306 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 VPS4AQ9UN37 437 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 DTNAQ9Y4J8 743 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 PCDHB2Q9Y5E7 798 aa4.2□□□□□ -1.74
VAPA-206ENST00000583475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 M0QZQ0 153 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 RRHO14718 337 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 HNRNPDLO14979 420 aaKnown RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 PLA2G6O60733 806 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 RNF8O76064 485 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 VIPP01282 170 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 HOXD9P28356 352 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 DUSP1P28562 367 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 MMP13P45452 471 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 YPEL5P62699 121 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 CFHR1Q03591 330 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 NSUN2Q08J23 767 aaKnown RBP eCLIP4.19□□□□□ -1.74
VAPA-206ENST00000583475 GAB1Q13480 694 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 BFSP2Q13515 415 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 RAB30Q15771 203 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 CCSAPQ6IQ19 270 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 CCDC144NLQ6NUI1 221 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 ACSM6Q6P461 480 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 TFAP2DQ7Z6R9 452 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 UBE2Q1Q7Z7E8 422 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 SRLQ86TD4 932 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 C16orf71Q8IYS4 520 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 COQ8BQ96D53 544 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 P2RY11Q96G91 374 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 TMEM79Q9BSE2 394 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms