RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 KCNAB1Q14722 419 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 TMTC4Q5T4D3 741 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 VPS53Q5VIR6 699 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 RAP1GAP2Q684P5 730 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 USP49Q70CQ1 688 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 AMIGO2Q86SJ2 522 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 RAB11FIP4Q86YS3 637 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 RASGRP3Q8IV61 690 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 ABRAQ8N0Z2 381 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 GALNT15Q8N3T1 639 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 LNX2Q8N448 690 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 ATG4AQ8WYN0 398 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 PGBD1Q96JS3 809 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 ALG8Q9BVK2 526 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 VN1R3Q9BXE9 311 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 AMBRA1Q9C0C7 1298 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 TP63Q9H3D4 680 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 GLOD4Q9HC38 313 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 GBA2Q9HCG7 927 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 IGSF9Q9P2J2 1179 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 VPS51Q9UID3 782 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 NFU1Q9UMS0 254 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 GTF2A1LQ9UNN4 478 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 USP22Q9UPT9 525 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 SH2B3Q9UQQ2 575 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 SSX2IPQ9Y2D8 614 aa4.33□□□□□ -1.72
SMCHD1-209ENST00000583441 M0R3H8 397 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 PSMD9O00233 223 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 ASNA1O43681 348 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 PEX1O43933 1283 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 NTSR2O95665 410 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 DHRS4L1P0CG22 281 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 VEGFAP15692 232 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 PECAM1P16284 738 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 PPP3CBP16298 524 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 GATA3P23771 443 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 UQCRC1P31930 480 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 GATMP50440 423 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 PLCD1P51178 756 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 ARL4CP56559 192 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 NBPF8Q3BBV2 869 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 PTCHD3Q3KNS1 767 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 ZNF618Q5T7W0 954 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 DEPDC1Q5TB30 811 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 ABLIM2Q6H8Q1 611 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 KLHL17Q6TDP4 642 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 NEK8Q86SG6 692 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 NRSN1Q8IZ57 195 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 SSH3Q8TE77 659 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 STYXQ8WUJ0 223 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 RSPRY1Q96DX4 576 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 WBP1Q96G27 269 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 HIST1H2AAQ96QV6 131 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 GRHPRQ9UBQ7 328 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 SNX14Q9Y5W7 946 aa4.32□□□□□ -1.72
SMCHD1-209ENST00000583441 COL15A1P39059 1388 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 CCDC151A5D8V7 595 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 PRKCBP05771 671 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 SRGAP2BP0DMP2 458 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 ARP10275 920 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 HGFP14210 728 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 ST3GAL2Q16842 350 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 ADCK5Q3MIX3 580 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 ARHGAP15Q53QZ3 475 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 ATPAF1Q5TC12 328 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 VWA1Q6PCB0 445 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 TMEM171Q8WVE6 324 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 WDR60Q8WVS4 1066 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 SOCS4Q8WXH5 440 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 FKBP10Q96AY3 582 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 NAP1L4Q99733 375 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 RTKNQ9BST9 563 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 SAYSD1Q9NPB0 183 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 STEAP1Q9UHE8 339 aa4.31□□□□□ -1.72
SMCHD1-209ENST00000583441 PCDH17O14917 1159 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 PPM1DO15297 605 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 TNFRSF6BO95407 300 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 ADORA2AP29274 412 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 EPHB2P29323 1055 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 TIRAPP58753 221 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 CSHL1Q14406 222 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 PTPRRQ15256 657 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 SF3B3Q15393 1217 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 ALFQ53S48 1182 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 ZNF782Q6ZMW2 699 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 RAB11FIP2Q7L804 512 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 YTHDF3Q7Z739 585 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 CCDC117Q8IWD4 279 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 FSTL5Q8N475 847 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 NGDNQ8NEJ9 315 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 TOR1AIP2Q8NFQ8 470 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 SLC30A5Q8TAD4 765 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 MYCBPAPQ8TBZ2 947 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 STT3BQ8TCJ2 826 aa4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 OTUD7AQ8TE49 926 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-209ENST00000583441 LPIN2Q92539 896 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms