RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 RBM41Q96IZ5 413 aaKnown RBP6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 GDAP1L1Q96MZ0 367 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DPH5Q9H2P9 285 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RXFP1Q9HBX9 757 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 PNPLA8Q9NP80 782 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 ENTPD7Q9NQZ7 604 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 MRPL17Q9NRX2 175 aaKnown RBP6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DDX56Q9NY93 547 aaKnown RBP6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 CWC15Q9P013 229 aaKnown RBP6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RNF14Q9UBS8 474 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 RASAL2Q9UJF2 1139 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 DNPEPQ9ULA0 475 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 INSL5Q9Y5Q6 135 aa6.4□□□□□ -1.38
RNU4ATAC-201ENST00000580972 GOLGA6L7A0A1B0GV03 622 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC12A8A0AV02 714 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FAM92AA1XBS5 289 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C2orf78A6NCI8 922 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C2orf71A6NGG8 1288 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 BHMG1C9JSJ3 638 aaPredicted RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 F5H423 210 aaPredicted RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DYNC1I1O14576 645 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PRRG1O14668 218 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PER2O15055 1255 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCL16O15467 120 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 LIASO43766 372 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CREB3O43889 395 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MFSD11O43934 449 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RFPL2O75678 378 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KRT7P08729 469 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FAM153BP0C7A2 387 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 H2AFXP16104 143 aaPredicted RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 EPCAMP16422 314 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GJA1P17302 382 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PTPN7P35236 360 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ADRA1BP35368 520 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PPM1AP35813 382 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CXCR3P49682 368 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NUMBP49757 651 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KCNQ1P51787 676 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CLCN6P51797 869 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GDF10P55107 478 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CYP4F8P98187 520 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 OTUD4Q01804 1114 aaKnown RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GBE1Q04446 702 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KRT17Q04695 432 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ITIH3Q06033 890 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC10A2Q12908 348 aaPredicted RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PPP2R5EQ16537 467 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CYP1B1Q16678 543 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FAM153CQ494X1 144 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ANKRD20A8PQ5CZ79 823 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C10orf120Q5SQS8 335 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ERMARDQ5T6L9 678 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF697Q5TEC3 545 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 LILRA6Q6PI73 481 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 BBS12Q6ZW61 710 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ARCQ7LC44 396 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 STRADAQ7RTN6 431 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TMEM150AQ86TG1 271 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CIR1Q86X95 450 aaPredicted RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MIB1Q86YT6 1006 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SCML4Q8N228 414 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GPR161Q8N6U8 529 aaKnown RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PLD5Q8N7P1 536 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF461Q8TAF7 563 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ACTL9Q8TC94 416 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PHOSPHO2Q8TCD6 241 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GDPD5Q8WTR4 605 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RNF139Q8WU17 664 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DEPDC1BQ8WUY9 529 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TEKT4Q8WW24 435 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RNF34Q969K3 372 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SPATA17Q96L03 361 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FCRL2Q96LA5 508 aaPredicted RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CSPG4P5Q96PW8 444 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RNF157Q96PX1 679 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TTLL2Q9BWV7 592 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TKTL2Q9H0I9 626 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SMOC2Q9H3U7 446 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 IL21Q9HBE4 155 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 EPB41L5Q9HCM4 733 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 AAASQ9NRG9 546 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF446Q9NWS9 450 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 HCFC1R1Q9NWW0 138 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FAM153AQ9UHL3 310 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CDH22Q9UJ99 828 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FBXW11Q9UKB1 542 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 STAP1Q9ULZ2 295 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NEU3Q9UQ49 428 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SNX24Q9Y343 169 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KIAA0100Q14667 2235 aaKnown RBP6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TSC2P49815 1807 aa6.39□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KAT6AQ92794 2004 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GOLGA6L10A0A0M3HER8 536 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF840PA6NDX5 716 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms