RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 YWHAGP61981 247 aaKnown RBP eCLIP10.35□□□□□ -0.75
GGA3-209ENST00000580646 ARID5AQ03989 594 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 KLHL30Q0D2K2 578 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 GAS6Q14393 721 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 MTF1Q14872 753 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 PON2Q15165 354 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 ZNF77Q15935 545 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 CLEC16AQ2KHT3 1053 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 PTPN20Q4JDL3 420 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 DGKKQ5KSL6 1271 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 TAF3Q5VWG9 929 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 E4F1Q66K89 784 aaPredicted RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 HGSNATQ68CP4 663 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 TSSK4Q6SA08 328 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 ARCQ7LC44 396 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 SCD5Q86SK9 330 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 DDX42Q86XP3 938 aaKnown RBP eCLIP10.35□□□□□ -0.75
GGA3-209ENST00000580646 PHF13Q86YI8 300 aaPredicted RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 TTC16Q8NEE8 873 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 OR8K1Q8NGG5 319 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 OLIG1Q8TAK6 271 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 SH3RF2Q8TEC5 729 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 VCPIP1Q96JH7 1222 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 CPXM1Q96SM3 734 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 HAUS4Q9H6D7 363 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 RRAGDQ9NQL2 400 aaPredicted RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 PRMT8Q9NR22 394 aaPredicted RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 ABCC13Q9NSE7 274 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 OLA1Q9NTK5 396 aaKnown RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 RBM12Q9NTZ6 932 aaKnown RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.35□□□□□ -0.75
GGA3-209ENST00000580646 TMEM51Q9NW97 253 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 DUS2Q9NX74 493 aaKnown RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 CHORDC1Q9UHD1 332 aaPredicted RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 ARHGAP26Q9UNA1 814 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 RIF1Q5UIP0 2472 aaKnown RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 TICRRQ7Z2Z1 1910 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 A0A1W2PQH9 124 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 OTOL1A6NHN0 477 aaPredicted RBP10.34□□□□□ -0.75
GGA3-209ENST00000580646 YJEFN3A6XGL0 299 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 AKR1B15C9JRZ8 316 aaPredicted RBP10.34□□□□□ -0.75
GGA3-209ENST00000580646 E7ENQ6 273 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 PAPSS1O43252 624 aaPredicted RBP10.34□□□□□ -0.75
GGA3-209ENST00000580646 TLR5O60602 858 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ABL1P00519 1130 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 TNFAIP3P21580 790 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 MMP8P22894 467 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ATP5C1P36542 298 aaKnown RBP10.34□□□□□ -0.75
GGA3-209ENST00000580646 CXCL12P48061 93 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 IFNAR2P48551 515 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 CCR3P51677 355 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 CDK17Q00537 523 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 AMPD2Q01433 879 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 USP4Q13107 963 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 EFHC1Q5JVL4 640 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 MSANTD2Q6P1R3 559 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 OLFML1Q6UWY5 402 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 TOGARAM2Q6ZUX3 1019 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ZNF571Q7Z3V5 609 aaPredicted RBP10.34□□□□□ -0.75
GGA3-209ENST00000580646 TMC6Q7Z403 805 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 VPS36Q86VN1 386 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ERICH1Q86X53 443 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 PASD1Q8IV76 773 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 SYNPOQ8N3V7 929 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 SPEM1Q8N4L4 309 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ZBTB44Q8NCP5 570 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 OSCP1Q8WVF1 389 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 CPLX3Q8WVH0 158 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ATRIPQ8WXE1 791 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 GOLGA1Q92805 767 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 NELL1Q92832 810 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 C18orf8Q96DM3 657 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 RNF38Q9H0F5 515 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ECT2Q9H8V3 914 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 NMUR1Q9HB89 426 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 ZSCAN32Q9NX65 697 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 WDR35Q9P2L0 1181 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 NAGPAQ9UK23 515 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 STRIP2Q9ULQ0 834 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 PCDHGA2Q9Y5H1 932 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 WNT6Q9Y6F9 365 aa10.34□□□□□ -0.75
GGA3-209ENST00000580646 DNAH14Q0VDD8 3507 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 SSU72P8A0A1W2PR75 194 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 LEFTY2O00292 366 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 TRDMT1O14717 391 aaKnown RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 COCHO43405 550 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 HSF2BPO75031 334 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 LTFP02788 710 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 ERBB2P04626 1255 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 CALB1P05937 261 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 RARGP13631 454 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 GJA4P35212 333 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 NSFP46459 744 aaKnown RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 PGFP49763 221 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 YWHAZP63104 245 aaKnown RBP10.33□□□□□ -0.76
GGA3-209ENST00000580646 ZXDBP98169 803 aa10.33□□□□□ -0.76
GGA3-209ENST00000580646 FOXK2Q01167 660 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms