RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 GOLGA1Q92805 767 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 BBS2Q9BXC9 721 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 SLC4A5Q9BY07 1137 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 EBF1Q9UH73 591 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 FBXO10Q9UK96 956 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 MMP17Q9ULZ9 603 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 PCDHGC3Q9UN70 934 aa15.52■□□□□ 0.08
SS18-212ENST00000579061 FRYLO94915 3013 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 NEDD8-MDP1E9PL57 170 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 APBB3O95704 486 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 LATS1O95835 1130 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 HMBSP08397 361 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
SS18-212ENST00000579061 USP8P40818 1118 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 KIR2DL1P43626 348 aaPredicted RBP15.51■□□□□ 0.07
SS18-212ENST00000579061 PTK2Q05397 1052 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 KDSRQ06136 332 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 MESP2Q0VG99 397 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 KCNMA1Q12791 1236 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 STX1AQ16623 288 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 C2orf27AQ580R0 203 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 CDKAL1Q5VV42 579 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
SS18-212ENST00000579061 GRAMD4Q6IC98 578 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 DPY19L2P1Q6NXN4 242 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 DENND1BQ6P3S1 775 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 TPGS1Q6ZTW0 290 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 BEND5Q7L4P6 421 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 TMEM110Q86TL2 294 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 FAM217AQ8IXS0 508 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 EDEM1Q92611 657 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 TRIM62Q9BVG3 475 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 ST7Q9NRC1 585 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 AGO1Q9UL18 857 aaKnown RBP15.51■□□□□ 0.07
SS18-212ENST00000579061 RAB23Q9ULC3 237 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 STARD13Q9Y3M8 1113 aa15.51■□□□□ 0.07
SS18-212ENST00000579061 RALGAPA1Q6GYQ0 2036 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 TBC1D3BA6NDS4 549 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 PES1O00541 588 aaKnown RBP15.5■□□□□ 0.07
SS18-212ENST00000579061 HRO43593 1189 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 PENKP01210 267 aaPredicted RBP15.5■□□□□ 0.07
SS18-212ENST00000579061 TPM2P07951 284 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 HARS2P49590 506 aaKnown RBP15.5■□□□□ 0.07
SS18-212ENST00000579061 SEC13P55735 322 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 BPIFB4P59827 614 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 ZNF445P59923 1031 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 SIM2Q14190 667 aaPredicted RBP15.5■□□□□ 0.07
SS18-212ENST00000579061 KLHDC7AQ5VTJ3 777 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 LAIR1Q6GTX8 287 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 TRMT11Q7Z4G4 463 aaKnown RBP15.5■□□□□ 0.07
SS18-212ENST00000579061 DENND1CQ8IV53 801 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 FAM71AQ8IYT1 594 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 CLEC4CQ8WTT0 213 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 LHX5Q9H2C1 402 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 ACP6Q9NPH0 428 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 DNAJC17Q9NVM6 304 aaKnown RBP15.5■□□□□ 0.07
SS18-212ENST00000579061 NCDNQ9UBB6 729 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 SFMBT1Q9UHJ3 866 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 STOML2Q9UJZ1 356 aa15.5■□□□□ 0.07
SS18-212ENST00000579061 FOXN3O00409 490 aaPredicted RBP15.49■□□□□ 0.07
SS18-212ENST00000579061 PIK3R2O00459 728 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 AXIN1O15169 862 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 CLCN1P35523 988 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 TIE1P35590 1138 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 DGKGP49619 791 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 DGKEP52429 567 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 RING1Q06587 406 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 NNTQ13423 1086 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 CRY1Q16526 586 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 EOGTQ5NDL2 527 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 FYB2Q5VWT5 728 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 SFTPA1Q8IWL2 248 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 UNC45BQ8IWX7 931 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 SCUBE3Q8IX30 993 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 GPR161Q8N6U8 529 aaKnown RBP15.49■□□□□ 0.07
SS18-212ENST00000579061 IL17RCQ8NAC3 791 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 TSTD1Q8NFU3 115 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 GAB3Q8WWW8 586 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 HHIPQ96QV1 700 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 IRX2Q9BZI1 471 aaPredicted RBP15.49■□□□□ 0.07
SS18-212ENST00000579061 MIS12Q9H081 205 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 PLCB1Q9NQ66 1216 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 CYTH4Q9UIA0 394 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 AJAP1Q9UKB5 411 aaPredicted RBP15.49■□□□□ 0.07
SS18-212ENST00000579061 SLC27A6Q9Y2P4 619 aa15.49■□□□□ 0.07
SS18-212ENST00000579061 PAPSS1O43252 624 aaPredicted RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 KLF8O95600 359 aaPredicted RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 IGLV3-27P01718 113 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 CYBBP04839 570 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 CISD3P0C7P0 127 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 HOXC13P31276 330 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 MYL5Q02045 173 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 PDCLQ13371 301 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 DRAP1Q14919 205 aaPredicted RBP15.48■□□□□ 0.07
SS18-212ENST00000579061 KRT31Q15323 416 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 C10orf76Q5T2E6 689 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 EMC10Q5UCC4 262 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 NUGGCQ68CJ6 796 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 PRR23BQ6ZRT6 265 aa15.48■□□□□ 0.07
SS18-212ENST00000579061 C11orf57Q6ZUT1 292 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms