RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 RIPOR3Q96MK2 946 aa4.74□□□□□ -1.65
TRAPPC8-205ENST00000578658 PCDHAC1Q9H158 963 aa4.74□□□□□ -1.65
TRAPPC8-205ENST00000578658 ZMYND8Q9ULU4 1186 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC8-205ENST00000578658 MAFFQ9ULX9 164 aa4.74□□□□□ -1.65
TRAPPC8-205ENST00000578658 SPATA31A1Q5TZJ5 1347 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 DSCR3O14972 297 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 MYL1P05976 194 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 NBPF7P0C2Y1 421 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 GALNSP34059 522 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 RAE1P78406 368 aaKnown RBP4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 HNRNPA0Q13151 305 aaKnown RBP4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 ATP1A4Q13733 1029 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 FAM90A2PQ658T7 463 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 TXLNBQ8N3L3 684 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 OR2C3Q8N628 320 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 GLIS1Q8NBF1 620 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 DENND1AQ8TEH3 1009 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 ADGRE3Q9BY15 652 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 RXFP3Q9NSD7 469 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 RGL1Q9NZL6 768 aa4.73□□□□□ -1.65
TRAPPC8-205ENST00000578658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 FAM234BA2RU67 622 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 MOSPD3O75425 235 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 PECAM1P16284 738 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 DRD1P21728 446 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 JAK3P52333 1124 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 AK2P54819 239 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 WDR5P61964 334 aaKnown RBP4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 TRIP6Q15654 476 aaKnown RBP4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 MAPKAPK3Q16644 382 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 Q4G0T1 1027 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 CC2D1BQ5T0F9 858 aaKnown RBP4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 IZUMO3Q5VZ72 239 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 IL31Q6EBC2 164 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 TLDC1Q6P9B6 456 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 PARD3BQ8TEW8 1205 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 PCGF6Q9BYE7 350 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 VPS16Q9H269 839 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 TUBA8Q9NY65 449 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
TRAPPC8-205ENST00000578658 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 EEF1GP26641 437 aaKnown RBP4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 THBS4P35443 961 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 MMP13P45452 471 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 GHRHRQ02643 423 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 CFHR1Q03591 330 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 NSUN2Q08J23 767 aaKnown RBP eCLIP4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 PICALMQ13492 652 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 ARHGAP15Q53QZ3 475 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 CCSAPQ6IQ19 270 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 PRSS3P2Q8NHM4 247 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 PIGOQ8TEQ8 1089 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 OVCA2Q8WZ82 227 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 COQ8BQ96D53 544 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 CCDC138Q96M89 665 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 NUDT22Q9BRQ3 303 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 ABHD10Q9NUJ1 306 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 PCDHB2Q9Y5E7 798 aa4.71□□□□□ -1.66
TRAPPC8-205ENST00000578658 C16orf96A6NNT2 1141 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 PPEF2O14830 753 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 DHHO43323 396 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 VIPP01282 170 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 DUSP1P28562 367 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 PTGER1P34995 402 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 NEK3P51956 506 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 KRTAP10-11P60412 298 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 YPEL5P62699 121 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 KPNB1Q14974 876 aaKnown RBP4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 PFKFB3Q16875 520 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 CCDC181Q5TID7 509 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 ANO7Q6IWH7 933 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 PIK3AP1Q6ZUJ8 805 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 C16orf71Q8IYS4 520 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 IGFBPL1Q8WX77 278 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 ZNF566Q969W8 418 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 GRAMD1AQ96CP6 724 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 SIGLEC11Q96RL6 698 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 SPRTNQ9H040 489 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 NUAK2Q9H093 628 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 CERS4Q9HA82 394 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 FNIP2Q9P278 1114 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 VPS4AQ9UN37 437 aa4.7□□□□□ -1.66
TRAPPC8-205ENST00000578658 SETD1BQ9UPS6 1966 aaKnown RBP4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 PODXLO00592 558 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 RRHO14718 337 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 MATN1P21941 496 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 MMP8P22894 467 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 TACR3P29371 465 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 IGHMBP2P38935 993 aaKnown RBP4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 HSPA7P48741 367 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 SEMA3BQ13214 749 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 BFSP2Q13515 415 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 MPEG1Q2M385 716 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
TRAPPC8-205ENST00000578658 FBXO38Q6PIJ6 1188 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms