RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 THOC5Q13769 683 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 GDAP1Q8TB36 358 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 DDI1Q8WTU0 396 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SCYL1Q96KG9 808 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SMC6Q96SB8 1091 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 R3HDM2Q9Y2K5 976 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 H0Y626 953 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 ITGB1P05556 798 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 HSPA1AP0DMV8 641 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 HSPA1BP0DMV9 641 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 RBL1P28749 1068 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 RECQLP46063 649 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SLC5A3P53794 718 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 UBXN11Q5T124 520 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 ZNF662Q6ZS27 426 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 ARHGAP18Q8N392 663 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SKA2Q8WVK7 121 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 ATP2A3Q93084 1043 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 PWWP2AQ96N64 755 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 TMEM209Q96SK2 561 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 HNRNPABQ99729 332 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 CORO1BQ9BR76 489 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 CCDC68Q9H2F9 335 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 RASA4BC9J798 803 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 F5H5T6 163 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 RASA4O43374 803 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 TLR5O60602 858 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 USP12O75317 370 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SLC2A3P11169 496 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 STIP1P31948 543 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 BEND6Q5SZJ8 279 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 FBXO46Q6PJ61 603 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 C3orf62Q6ZUJ4 267 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 KATNAL2Q8IYT4 538 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 PYROXD2Q8N2H3 581 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 GABPB2Q8TAK5 448 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SREK1Q8WXA9 508 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 DDX1Q92499 740 aaKnown RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 ERLEC1Q96DZ1 483 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 KLF6Q99612 283 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-205ENST00000575815 ACBD6Q9BR61 282 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 CAPS2Q9BXY5 557 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 CNGB3Q9NQW8 809 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 PAK5Q9P286 719 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 SNX10Q9Y5X0 201 aa8.67□□□□□ -1.02
NCBP3-205ENST00000575815 C3orf70A6NLC5 250 aaPredicted RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 EBAG9O00559 213 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 PIRO00625 290 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ATP8B1O43520 1251 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 PIAS1O75925 651 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 TBX18O95935 607 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 RARGP13631 454 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 NR1D1P20393 614 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 PMLP29590 882 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 MAGEA4P43358 317 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 RPL21P46778 160 aaKnown RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 SLC11A1P49279 550 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 VCPP55072 806 aaKnown RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 CAV1Q03135 178 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 CDH18Q13634 790 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ITPRIPL1Q6GPH6 555 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 EFHBQ8N7U6 833 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 BCAS4Q8TDM0 211 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 PPM1EQ8WY54 764 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ANKRD7Q92527 254 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 USP6NLQ92738 828 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 PPP2R3CQ969Q6 453 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 THOC1Q96FV9 657 aaKnown RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 PIWIL1Q96J94 861 aaKnown RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 BCO2Q9BYV7 579 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 NRDE2Q9H7Z3 1164 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 HCSTQ9UBK5 93 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ZC3H7BQ9UGR2 993 aaKnown RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 MYH15Q9Y2K3 1946 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 LTBP1Q14766 1721 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 A0A1W2PQH9 124 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 BTNL10A8MVZ5 291 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 CBX4O00257 560 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 DDHD2O94830 711 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 CYBBP04839 570 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 MYBL2P10244 700 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 HDCP19113 662 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 TWF1Q12792 350 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ZNF177Q13360 481 aaPredicted RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 SPARCL1Q14515 664 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 LRRC14Q15048 493 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ANO4Q32M45 955 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 SYPL2Q5VXT5 272 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 RAP1GAP2Q684P5 730 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 SLC39A5Q6ZMH5 540 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 TPGS1Q6ZTW0 290 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 CARNMT1Q8N4J0 409 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ZIM3Q96PE6 472 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 NSRP1Q9H0G5 558 aaKnown RBP8.66□□□□□ -1.02
NCBP3-205ENST00000575815 SEMA4AQ9H3S1 761 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 ABCC13Q9NSE7 274 aa8.66□□□□□ -1.02
NCBP3-205ENST00000575815 MPP6Q9NZW5 540 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms