RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CYP2D7A0A087X1C5 515 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 OR2W5A6NFC9 320 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 KCNU1A8MYU2 1149 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 PODXLO00592 558 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 DSCR3O14972 297 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 BCAR3O75815 825 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 SFPQP23246 707 aaKnown RBP eCLIP5.58□□□□□ -1.52
CDC27-216ENST00000574304 LMO1P25800 156 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 SEC23BQ15437 767 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 MAPKAPK3Q16644 382 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 TMEM196Q5HYL7 178 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 TNIP3Q96KP6 325 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 ZNF778Q96MU6 729 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 C1QTNF7Q9BXJ2 289 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 TMEM8AQ9HCN3 771 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 FNIP2Q9P278 1114 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 RNF7Q9UBF6 113 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 BTBD3Q9Y2F9 522 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 PCDHGB2Q9Y5G2 931 aa5.58□□□□□ -1.52
CDC27-216ENST00000574304 VIPP01282 170 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 MBPP02686 304 aaPredicted RBP5.57□□□□□ -1.52
CDC27-216ENST00000574304 HMGB1P09429 215 aaKnown RBP5.57□□□□□ -1.52
CDC27-216ENST00000574304 HSPA7P48741 367 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 JAK3P52333 1124 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 RAE1P78406 368 aaKnown RBP5.57□□□□□ -1.52
CDC27-216ENST00000574304 NSUN2Q08J23 767 aaKnown RBP eCLIP5.57□□□□□ -1.52
CDC27-216ENST00000574304 BFSP2Q13515 415 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 KLF9Q13886 244 aaPredicted RBP5.57□□□□□ -1.52
CDC27-216ENST00000574304 MPEG1Q2M385 716 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 MAP9Q49MG5 647 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 TMTC4Q5T4D3 741 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 MEX3CQ5U5Q3 659 aaKnown RBP5.57□□□□□ -1.52
CDC27-216ENST00000574304 FAM90A2PQ658T7 463 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 TLDC1Q6P9B6 456 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 SRLQ86TD4 932 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 SMG7Q92540 1137 aaKnown RBP5.57□□□□□ -1.52
CDC27-216ENST00000574304 MAP4K1Q92918 833 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 KIAA1191Q96A73 305 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 SGCZQ96LD1 299 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 VPS4AQ9UN37 437 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 PCDHB2Q9Y5E7 798 aa5.57□□□□□ -1.52
CDC27-216ENST00000574304 FCHO1O14526 889 aa5.56□□□□□ -1.52
CDC27-216ENST00000574304 HNRNPDLO14979 420 aaKnown RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 SRGAP2BP0DMP2 458 aa5.56□□□□□ -1.52
CDC27-216ENST00000574304 ATP5F1P24539 256 aaPredicted RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 WDR5P61964 334 aaKnown RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 SEMA3BQ13214 749 aa5.56□□□□□ -1.52
CDC27-216ENST00000574304 PFKFB3Q16875 520 aaPredicted RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 C1QL2Q7Z5L3 287 aa5.56□□□□□ -1.52
CDC27-216ENST00000574304 CLASRPQ8N2M8 674 aaKnown RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 DEPTORQ8TB45 409 aa5.56□□□□□ -1.52
CDC27-216ENST00000574304 RPL36ALQ969Q0 106 aaKnown RBP5.56□□□□□ -1.52
CDC27-216ENST00000574304 SEMA5BQ9P283 1151 aa5.56□□□□□ -1.52
CDC27-216ENST00000574304 SPATA31A1Q5TZJ5 1347 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 E5RJQ4 531 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 MMP8P22894 467 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 GSTM5P46439 218 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 GHRHRQ02643 423 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 KPNB1Q14974 876 aaKnown RBP5.55□□□□□ -1.52
CDC27-216ENST00000574304 ETFDHQ16134 617 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 ZNF425Q6IV72 752 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 FAM186BQ8IYM0 893 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 DENND1AQ8TEH3 1009 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 ELAC2Q9BQ52 826 aaKnown RBP5.55□□□□□ -1.52
CDC27-216ENST00000574304 NUDT22Q9BRQ3 303 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 NUAK2Q9H093 628 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 NECTIN3Q9NQS3 549 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 TM7SF3Q9NS93 570 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 RXFP3Q9NSD7 469 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 ABHD10Q9NUJ1 306 aa5.55□□□□□ -1.52
CDC27-216ENST00000574304 TP73O15350 636 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 PLIN1O60240 522 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 PLA2G6O60733 806 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 ABCB4P21439 1286 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 DUSP1P28562 367 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 TACR3P29371 465 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
CDC27-216ENST00000574304 MMP13P45452 471 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 RAB30Q15771 203 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 CNGA3Q16281 694 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 P3H1Q32P28 736 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 ARL6IP4Q66PJ3 421 aaKnown RBP5.54□□□□□ -1.52
CDC27-216ENST00000574304 ANO7Q6IWH7 933 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 CCDC144NLQ6NUI1 221 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 PIK3AP1Q6ZUJ8 805 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 RASGRP3Q8IV61 690 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 CCDC146Q8IYE0 955 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 OVCA2Q8WZ82 227 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 GJA10Q969M2 543 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 EIF3CQ99613 913 aaKnown RBP5.54□□□□□ -1.52
CDC27-216ENST00000574304 ARL8BQ9NVJ2 186 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 CA14Q9ULX7 337 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 DTNAQ9Y4J8 743 aa5.54□□□□□ -1.52
CDC27-216ENST00000574304 IFIT2P09913 472 aaKnown RBP5.53□□□□□ -1.52
CDC27-216ENST00000574304 MATN1P21941 496 aa5.53□□□□□ -1.52
CDC27-216ENST00000574304 TRIP6Q15654 476 aaKnown RBP5.53□□□□□ -1.52
CDC27-216ENST00000574304 Q4G0T1 1027 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms