RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SHKBP1Q8TBC3 707 aa19.74■□□□□ 0.75
SCARF1-206ENST00000573852 LRRC39Q96DD0 335 aa19.74■□□□□ 0.75
SCARF1-206ENST00000573852 EBNA1BP2Q99848 306 aaKnown RBP19.74■□□□□ 0.75
SCARF1-206ENST00000573852 PPP1R12CQ9BZL4 782 aa19.74■□□□□ 0.75
SCARF1-206ENST00000573852 TSPAN16Q9UKR8 245 aa19.74■□□□□ 0.75
SCARF1-206ENST00000573852 ANGPTL2Q9UKU9 493 aa19.74■□□□□ 0.75
SCARF1-206ENST00000573852 SSC5DA1L4H1 1573 aa19.74■□□□□ 0.75
SCARF1-206ENST00000573852 KIF3CO14782 793 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 GAS2O43903 313 aaKnown RBP19.73■□□□□ 0.75
SCARF1-206ENST00000573852 GNAT1P11488 350 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 CLCN3P51790 818 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 ACTR3P61158 418 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 CDK18Q07002 472 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 TRMT5Q32P41 509 aaKnown RBP19.73■□□□□ 0.75
SCARF1-206ENST00000573852 BOLA3Q53S33 107 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 FOXB2Q5VYV0 432 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 CCDC33Q8N5R6 958 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 C12orf29Q8N999 325 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 FAM172AQ8WUF8 416 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 GPR20Q99678 358 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 SNRNP25Q9BV90 132 aaKnown RBP19.73■□□□□ 0.75
SCARF1-206ENST00000573852 CYP3A43Q9HB55 503 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 GBA2Q9HCG7 927 aaPredicted RBP19.73■□□□□ 0.75
SCARF1-206ENST00000573852 BTBD7Q9P203 1132 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 TNFSF13BQ9Y275 285 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 C2CD2Q9Y426 696 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 CIB2O75838 187 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 CACNA2D1P54289 1103 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
SCARF1-206ENST00000573852 SDR42E2A6NKP2 422 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 BIRC5O15392 142 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 GSRP00390 522 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 SERPINA6P08185 405 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 GSTA2P09210 222 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 PPP6R3Q5H9R7 873 aaPredicted RBP19.72■□□□□ 0.75
SCARF1-206ENST00000573852 UNC5BQ8IZJ1 945 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 SLC25A41Q8N5S1 370 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 RAB3IL1Q8TBN0 382 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 HPDLQ96IR7 371 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 MMP19Q99542 508 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 MAGEA13PA6NCF6 341 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 MEI4A8MW99 385 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 TGFB3P10600 412 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 WASHC5Q12768 1159 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 DNAL1Q4LDG9 190 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 C16orf46Q6P387 395 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 SLC30A9Q6PML9 568 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 LCLAT1Q6UWP7 414 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 ZNF778Q96MU6 729 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 TTC1Q99614 292 aa19.72■□□□□ 0.75
SCARF1-206ENST00000573852 PAPOLBQ9NRJ5 636 aaKnown RBP19.72■□□□□ 0.75
SCARF1-206ENST00000573852 BARX2Q9UMQ3 279 aaPredicted RBP19.72■□□□□ 0.75
SCARF1-206ENST00000573852 EVPLQ92817 2033 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 ITM2AO43736 263 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 LYPLA1O75608 230 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 CPOXP36551 454 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 SLC10A2Q12908 348 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 C1orf146Q5VVC0 180 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 DEPDC1BQ8WUY9 529 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 KHSRPQ92945 711 aaKnown RBP eCLIP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 MAGEB5Q9BZ81 275 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 THAP1Q9NVV9 213 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 DDX43Q9NXZ2 648 aaKnown RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 PPM1HQ9ULR3 514 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 PCDHA11Q9Y5I1 949 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 USP1O94782 785 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 C6orf222P0C671 652 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 RPS12P25398 132 aaKnown RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 GBE1Q04446 702 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 C11orf91Q3C1V1 193 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 FASTKD1Q53R41 847 aaKnown RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 EFCAB12Q6NXP0 572 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 PMF1Q6P1K2 205 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 IZUMO2Q6UXV1 221 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 KLRG1Q96E93 195 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 APOL6Q9BWW8 343 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 VRTNQ9H8Y1 702 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 XAB2Q9HCS7 855 aaKnown RBP19.71■□□□□ 0.75
SCARF1-206ENST00000573852 SLC17A6Q9P2U8 582 aa19.71■□□□□ 0.75
SCARF1-206ENST00000573852 LGR5O75473 907 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 UBTFL6P0CB48 400 aaPredicted RBP19.7■□□□□ 0.74
SCARF1-206ENST00000573852 TFE3P19532 575 aaPredicted RBP19.7■□□□□ 0.74
SCARF1-206ENST00000573852 ADORA2AP29274 412 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 ATICP31939 592 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 PAPOLAP51003 745 aaKnown RBP19.7■□□□□ 0.74
SCARF1-206ENST00000573852 TUBB3Q13509 450 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 TBCCQ15814 346 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 TREML2Q5T2D2 321 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 C6orf163Q5TEZ5 329 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 OLFML1Q6UWY5 402 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 ARCQ7LC44 396 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 DDX50Q9BQ39 737 aaKnown RBP19.7■□□□□ 0.74
SCARF1-206ENST00000573852 NRDE2Q9H7Z3 1164 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 EMCNQ9ULC0 261 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 TRIP11Q15643 1979 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 UTRNP46939 3433 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 A0A088AWK7 358 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 GCATO75600 419 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms